Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0957 ATGGCTACAATTTCTTCAACTTGCTACCCCTTTGTTGCAACAATAATTTTATGTTCATATCCCATAACACTATTATGTGCAACAGTGGTAGAAGATCTCAAAAACTTGCACCCACCACCAGATTTTAACTCAACAATTATGAACAATTGTCAACACAACCCATCTCTTAGATATTGCACTTCCTATCACTATATGAACATTGATGAAATATTCAAATATAGTATTGTTGCTAGCCATCTTTGTAATGAATCAAAGAATCCTAATTGTGTTGAGTCATTTCCTAAAGTTGATATTAGAAACCGTCCAAATATTGCATCACTTTATTTGTCATTTGATTTCTTTTGGAAATATTGTCCTTTAAGCATAGTTTCTATTGATATTTCAAACAATTATATAAAGGGTAGTTTCCCTATTGATGTTCTTCATTGCACTCAAATTCAGGGTTTAGATTTGAGTATGAATGAGTTTTATGGTGAAATTCCAATTCAAAGTTTTAGTCCTTTGACAAATCTCACTTTTCTGAACCTGTCCTATAATTGTTTCTCAGAAAGTGAAGAACTTTCTGATTCTGAATTCTTTAAAAGGTTTAGTCCTTCAAGTTTTATTGATTCTGGTGCTATATTTGATCATAAAAAGTTTACATTAAAAGTTGTTATTTTATTGGTTAGTTTTCCCATCCTTGTGATTATGATGGTTATTTTCTTGGGTTGGGTTTGTTTTCAAAGACCTGATTTTCTACCAAGAAAATTTCAAAGAAGTGGGAAGTTTACACCAGCAATGTTAAAAGGAGCAACTTGTGGTTTTTCAAGTGAGAATTTGGTTGGAAAAAGTGATTTTGTTCATATCTATAAAGGGGTTTTAAGGGATGGTACTGAAGTGAAAATTGAGATGTATTGGGATAATTTATCAAGGGAAACTTATAAGAAATTTGTTGAAGAATGCAAGATTCTTTGTGAGTTAGATCACAAGAACCTTGTTAGAGTTCTAGGGTGGTGTAAGAGTAGAAAATTCAGGGCTATTATTACTGAATGGACAGAAGAAGAAAATGTTGAAATGTGGTTATTAGGTTCAGCTCCAACTTGGAAACATAGATTGAGAGTGTTAATTGGAGTTGTAGAATGCATGTGTTACTTGCAAGATGAATGGCCTGAAGTTGATTATGACCTCAACACAAATAGTGTTTTATTGTCTAACAATATGGAACCATTAATTTCAAGGTTCAAAGTTGGAGATCAAGAAGACAACAATTCAAAGATGTCTAAATTTGGAGTATTCTTGTTAGAGATGATACTTAGCAAGAAGGTTCAAGCAGAGTTTGATGAGGGTGAATCTGGATTCATCAAGTACATGAGAACCCTTCATTCTGAAGATTTGCTGCAAATGATTGATGAGAGAATGGAAGAAACTGAAACAACTAATCATCATGTTAAAAAGGTTATATCCCTTGGATTATTGTGCATAGACCAATCAAGTAGTGAGAAACCAAGTTTATCAGTGATATTTAATACTATAGCAACAGCCTACAAGGCTAGCATTGTTTTGCCATTTGCAAAGCATAGAATGTTGCATGGAGATAGATCTAAGTGA 1587 0.3289 MATISSTCYPFVATIILCSYPITLLCATVVEDLKNLHPPPDFNSTIMNNCQHNPSLRYCTSYHYMNIDEIFKYSIVASHLCNESKNPNCVESFPKVDIRNRPNIASLYLSFDFFWKYCPLSIVSIDISNNYIKGSFPIDVLHCTQIQGLDLSMNEFYGEIPIQSFSPLTNLTFLNLSYNCFSESEELSDSEFFKRFSPSSFIDSGAIFDHKKFTLKVVILLVSFPILVIMMVIFLGWVCFQRPDFLPRKFQRSGKFTPAMLKGATCGFSSENLVGKSDFVHIYKGVLRDGTEVKIEMYWDNLSRETYKKFVEECKILCELDHKNLVRVLGWCKSRKFRAIITEWTEEENVEMWLLGSAPTWKHRLRVLIGVVECMCYLQDEWPEVDYDLNTNSVLLSNNMEPLISRFKVGDQEDNNSKMSKFGVFLLEMILSKKVQAEFDEGESGFIKYMRTLHSEDLLQMIDERMEETETTNHHVKKVISLGLLCIDQSSSEKPSLSVIFNTIATAYKASIVLPFAKHRMLHGDRSK* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0957 528 Gene3D Transferase(Phosphotransferase) domain 1 414 506 - -
Lan10g0957 528 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 527 - -
Lan10g0957 528 Pfam Protein tyrosine and serine/threonine kinase 271 413 IPR001245 GO:0004672|GO:0006468
Lan10g0957 528 ProSiteProfiles Leucine-rich repeat profile. 170 191 IPR001611 GO:0005515
Lan10g0957 528 ProSiteProfiles Protein kinase domain profile. 268 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0957 528 Gene3D Phosphorylase Kinase; domain 1 246 344 - -
Lan10g0957 528 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 527 - -
Lan10g0957 528 SUPERFAMILY Protein kinase-like (PK-like) 250 504 IPR011009 -
Lan10g0957 528 Gene3D Ribonuclease Inhibitor 44 208 IPR032675 -
Lan10g0957 528 SUPERFAMILY L domain-like 84 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0957 Lan-Chr10 14345350 14347653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0957 252 518 Receptor kinase-like Gene Family AT4G11480 27.869 2.45e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan10g0957 PK_Tyr_Ser-Thr 5.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0957 - - gmx:100779045 773.852