Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0923 ATGTACAGCATGAGGAAGCCATGGTTCTGGCTTTCTCTTTTCATCCTCTCCTTCTCTTTTCAAATCGATCCTTCTCGCGCAACTCTAGCTTTCATCTCTACAAACCAGACTCTTTCAGGTGACCAAGTTCTTCTATCTAAAGATGGGATGTTTGAACTTGGTTTCTTCAAGTCAGGTAATTCCTCTAACTACTATATAGGCATGTGGTACAAAAGAGTCTCTCAAAGAACAATTGTTTGGGTAGCAAATAGAGACCAACCAGTGTCTGATAAGAACACAGCTGAGTTAACAATATTGGAAGGTAATTTAGTTCTCTTAGATGAATCTCAGAGTCAAGTTTGGTCAACAAACTTCAGTTCTCCAACCTCAGGTTCTGTTGTAGCTACTCTTTTAGATAATGGGAATCTCATTTTAAGAGATAGTGATGCATCAGATTTTCTGTGGCAGAGTTTTGATCATCCAACAGATACATTTCTTCCTGGTGGCAAACTTAAATTGGACAATAAAACAAAGCAGCCTCAGTATCTAACTTCATGGAAGAACAGTGAAGATCCTGCCACAGGTCTCTTCTCTCTGGAACTAGACCCTAAAGGATCCACTGAATTTCTCATTCTTAGGAATAAAAGTGTAGAGTATTGGACGAGCGGGACATGGAATGGACAAATTTTCAGTTTGGTTCCAGAAATGAGGTTGAATTACATCTTCAACTTTTCTTTTGTGTCAAACGAGAATGAAAGCTATTTCACCTACTCCCTGTATAATACTTCAATTTTGTCACGGTTAGTTATGGATGTCTCAGGGCAGATCCGGCAACTGACGTGGTTGGAAAACACTCAGCAATGGAATTTGTTTTGGTCACAGCCCAGACAGCAATGCGTTGTTGATGATTTCTGTGGTGCATTTGGGAGCTGCAGTGAAAGTTCATTGCCATATTGTAGTTGTCTACCTGGTTTTGTGCCAAAGTCACCATCTGAATGGAACCTTCAGGATTACTCAGGTGGGTGTCAGAGATCAACAAGGTTGCAATGTGAGAGTTTCAATCCTTCTAATGGGGAGGACGAGTTCCTCGAAATCTTTAATATGGCATTACCAAAAAATGCAGAATCTGTGAGAACAAGGAATGCTGAGGATTGTGAATCAATCTGCTTGAACAATTGCTCTTGTAGTGCTTATGCATATAATAGTAACGGTTGTTCAATTTGGATTGGAGACCTATTGAATCTTAGACAACCATCTTCAGATGATAGCAGTGGAGGAACTTTGTATCTCAAACTTGCAGCATCTGATTTTCCTAATGCAGGTAAAGGAAAATCCAAAAGACTGCCTTTGATTCTTGGGATTCCTCTTGCAAGTGTGGTTGTTATTCTGACATGTGCAGCTGTTTATGTTTATATACGGAAAAGGAAAATTGCTCGAAAACAAGAAAGGGAAATGATTCAGAGAAATAGAGGGCGCTTTTATGACAGTGAAAGAGAAGTGAAGGATTTAATAGATGAGGGGCATTTAGAGGAAAAGGACAATGAAGGTATAGAGGTACCATATTTTGATTTTGACAGCATAATAGTTGCAACAGACAACTTCTCACTTGCAAATAAGCTCGGACGAGGCGGTTATGGTCCCGTATACAAGGGTAAGCTTCAAGATGGTCAAGTTATTGCAGTAAAGAGGCTTTCCAGTGCTTCAAAGCAAGGTTTAAGGGAATTCAAGAATGAAGTTATTCTGATTGCCAAACTTCAGCATAGGAACCTTGTAAGATTAAGAGGCTATTGCATCAAAGGAGAAGAAAAAATTCTACTTTATGAATATATGCCTAACAGGAGCTTAGATTCATTTATATTCGATCGGGAACAAGGTGTACTTTTGGACTGGCAAATGCGATTTGACATAATTCGAGGAATTGCTCGAGGGATGCTCTATCTTCACCAAGACTCTAGGCTGAGAGTAATTCATAGGGATTTGAAAACTAGCAATATTCTTCTAGACAAGAAGATGCAACCAAAAATTTCAGACTTTGGATTAGCAAAAATATTCAGTGGCAAGGAGACTGAGGGGAATTCAGAGATGCTAGCGGGAACTTATGGATATATGGCTCCTGAGTCGGCCACAAAGGGATTTTTTTCAGCCAAATCTGATGTTTTCAGCTTCGGTGTGGTCCTACTTGAGATTATCAGCGGGAAAAAGAACATGGGGTTCTATGAGTCTGAACAAATTTCAAGTCTTATGGGTTATGCCTGGAGACTATGGACAGAAAAAAGGTTGTTGGATTTAATGGATTTGTCTCTGTGTGAAACTTGCAATGTGAATCAATTTACTAGGTCTGTACACATTGGTCTTTTATGCGTACAAGATGATCCGAATGATCGACCATCCATGTCAAATGTTGTGACAATGCTTGGTATTGAAACCCTCCCAAACCCTACACAACCAACCTTTTATGAAAGAAAGGTTCCAACCAACCATGCTTCTTACAGTAAACTAGCAACAAGTTTGCAACTTGATAGTATCTACGAAAGCTATCAAGATGGTCGATAA 2532 0.3953 MYSMRKPWFWLSLFILSFSFQIDPSRATLAFISTNQTLSGDQVLLSKDGMFELGFFKSGNSSNYYIGMWYKRVSQRTIVWVANRDQPVSDKNTAELTILEGNLVLLDESQSQVWSTNFSSPTSGSVVATLLDNGNLILRDSDASDFLWQSFDHPTDTFLPGGKLKLDNKTKQPQYLTSWKNSEDPATGLFSLELDPKGSTEFLILRNKSVEYWTSGTWNGQIFSLVPEMRLNYIFNFSFVSNENESYFTYSLYNTSILSRLVMDVSGQIRQLTWLENTQQWNLFWSQPRQQCVVDDFCGAFGSCSESSLPYCSCLPGFVPKSPSEWNLQDYSGGCQRSTRLQCESFNPSNGEDEFLEIFNMALPKNAESVRTRNAEDCESICLNNCSCSAYAYNSNGCSIWIGDLLNLRQPSSDDSSGGTLYLKLAASDFPNAGKGKSKRLPLILGIPLASVVVILTCAAVYVYIRKRKIARKQEREMIQRNRGRFYDSEREVKDLIDEGHLEEKDNEGIEVPYFDFDSIIVATDNFSLANKLGRGGYGPVYKGKLQDGQVIAVKRLSSASKQGLREFKNEVILIAKLQHRNLVRLRGYCIKGEEKILLYEYMPNRSLDSFIFDREQGVLLDWQMRFDIIRGIARGMLYLHQDSRLRVIHRDLKTSNILLDKKMQPKISDFGLAKIFSGKETEGNSEMLAGTYGYMAPESATKGFFSAKSDVFSFGVVLLEIISGKKNMGFYESEQISSLMGYAWRLWTEKRLLDLMDLSLCETCNVNQFTRSVHIGLLCVQDDPNDRPSMSNVVTMLGIETLPNPTQPTFYERKVPTNHASYSKLATSLQLDSIYESYQDGR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0923 843 CDD PAN_AP_plant 339 426 - -
Lan10g0923 843 CDD STKc_IRAK 533 798 - -
Lan10g0923 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 219 IPR036426 -
Lan10g0923 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Lan10g0923 843 SUPERFAMILY Protein kinase-like (PK-like) 509 817 IPR011009 -
Lan10g0923 843 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Lan10g0923 843 SMART serkin_6 527 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0923 843 Gene3D Transferase(Phosphotransferase) domain 1 603 805 - -
Lan10g0923 843 CDD B_lectin 35 154 IPR001480 -
Lan10g0923 843 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Lan10g0923 843 Pfam PAN-like domain 349 407 IPR003609 -
Lan10g0923 843 ProSiteProfiles Protein kinase domain profile. 527 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0923 843 Gene3D Phosphorylase Kinase; domain 1 492 602 - -
Lan10g0923 843 PIRSF SRK 1 841 IPR024171 GO:0004674
Lan10g0923 843 SMART ntp_6 350 425 IPR003609 -
Lan10g0923 843 Gene3D - 26 152 IPR036426 -
Lan10g0923 843 ProSiteProfiles PAN/Apple domain profile. 343 426 IPR003609 -
Lan10g0923 843 Pfam D-mannose binding lectin 77 180 IPR001480 -
Lan10g0923 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 824 - -
Lan10g0923 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 824 - -
Lan10g0923 843 Pfam Protein tyrosine and serine/threonine kinase 529 798 IPR001245 GO:0004672|GO:0006468
Lan10g0923 843 SMART blect_4 35 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0923 Lan-Chr10 13821104 13824410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0923 435 816 Receptor kinase-like Gene Family AT4G05200 48.062 1.37e-116 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan10g0923 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0923 - - lang:109358851 1697.18