Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0917 ATGATTTTTCACAAGGGCTCAAAGGTTTGGGTTCAGGACAAGGATTTCGTTTGGGTGGATGCTGAAGTTCTCGATTCTTCTAGTAACGGCACCATCCACCTCGTAACCGTTTCCGGCAAGACGGTTGTTTCTTCACCGGAGAAATTGTTGCCGAGGGACGCCGATGAAGATGAGCATGGTGGAGTTGAAGATATGACTAGGCTGGCTTATTTGAATGAGCCAGGAGTGTTGTACAATCTTCGTAGAAGATATGTGCTCAATGATATCTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCCTTCACGAACCTTCCTCATTTGTATGAGACCCATATGATGGAGCAATATAAGGGAGCGCCACTTGGTGAGCTTAGCCCTCATGTTTTTGCTGTCGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGCCAATCTATCTTGGTCAGTGGTGAAAGTGGCGCTGGAAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTATGTTGGTGGACGTGCTGCTGGTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCGCTTTTAGAGGCATTTGGTAATGCAAGGACTGTCAGGAATGATAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGAAGAATATCTGGTGCTGCAATTCGAACTTACTTACTGGAAAGATCACGAGTAGTTCAGATAACGGATCCCGAAAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAGGGATGCAGAGAAGTATAAGTTAGCACATCCTAGCCACTTCCACTATTTAAATCAAAGTAAAGTCTATGAACTAGACGGTGTAAGAAATGCTGAAGAATATGTGAATACGAGGAGGGCAATGGATGTTGTTGGCATAAGTAATGAGGACCAGGAAGCCATATTTCGTGTTTTAGCTGCAATTTTACATCTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGATTCATCAGTGATAAAAGATGAAAAATCAAGATTTCATATGCAGATGGCGGCTAATCTTTTCATGTGTGATGTAGACTTACTACTAGCAACATTGTGTACTCGTTCGATACAAACCCGAGAAGGATCTATTGTCAAAGCCCTTGATTGCAATGCTGCTGTTGCTGGTCGGGATGTTTTGGCAAAAACTGTTTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATAAATAGGTCTGTTGGGCAAGATACTAATTCCCAGATGCAAATTGGAGTTTTGGATATTTATGGTTTTGAATGCTTTAAGGACAATAGTTTTGAGCAATTCTGCATCAATTTTGCGAATGAAAAGCTCCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTACAGTAAAGAAGAAATTAACTGGAGTTACATTGAGTTTGTAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATTATTGCTCTGTTGGATGAAGCCTGCATGTTTCCAAGATCGACACATGAAACATTCTCAACAAAGTTATTTCATCATTGTAACTCTCATCCTAGGTTGGAAAAGGAAAAGTTCTCACAGACAGATTTTACCATGTCTCATTATGCTGGAAAGGTTACTTATCATACAGATACATTCTTAGACAAAAACCGTGATTATGTTGTTGTAGAACATTGTAATCTATTATCTCTTTCAAAATGCCCCTTCGTGTCTGGTCTTTTTCCTCTGTTAGCAGAGGAACCTTCAAGATCATCGTACAAGTTTTCTTCTGTGGCTTCTAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTCAAGTCAACAGAACCTCATTACGTACGATGTGTGAAGCCAAATTCTTTGAATCGACCACAAATGTTTGAGAATGCAAGCGTCAGACACCAATTGCGCTGTGGGGGTGTCCTTGAGGCTGTTCGGATAAGTCTGGCAGGTTATCCTACTCGAAGGACTTACTCAGAGTTTGTAGATCGCTACGGGGTAATAGCCCTGGAATATATGGATGGAAGTTATGATGATAAAGTTGCAACTGAGAAAATTTTGCGAATGCTCAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGCATTTTAGACTCCAAGCGTGCTGAAGTTTTGGACAATGCTGCGAAGTGTATTCAGCGCCGGCTGAGGACATTTGTTGCACACAAGCATTTCATCTCAGTTAGAGCAGCAGCAGTTTCTCTCCAGGCGTGCTGTAGGGGGTGCATTGCCCAAAATATGTATGCTGCTATACGGGAGAAAGCAGCGGTTATCTCCATTCAGAAATATATTCGTATGTGGCTAATGAGTCAGGCTTACCTGAAATTATATTCTTCTGCTATTATTATACAATCCCATGTCCGTGGTTTCGCGACTCGCCAAAGAATATTGCATGGAAGAGAGCATAAAGCTGCTACATTTATTCAGGCCTGTTGGAGGATGTCCAAGGTTAGGTCAGCCTTCAAGCAACATCAAGCTTCAATTTTGGCAGTACAATGCCTTTGGCGGTGTAGGCAAGCAAGAAAAGAGCTTCGTAGACTTAAACAAGAGGCTAATGAATCTGGTGCTCTCCGTCTTGCCAAGAGTAAACTTGAGAAGCAATTGGAAGAGCTCACCTGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCTAATGAAGAGGCTAAGCAAGCAGAGATTTCTAGACTTCAAAAGGTGATAGAAGCTTTGAATCTGGAATTAGATGTGGCTAAATTGGCAACAATCAATGAGTGCAACAAGAATGAAGTTCTACAGAACCAATTGAAATTATCAGTGAAGGAAAAACCCACTTTAGAAAGAGAGCTATTTGCAATGGAGGAAGTTCGAAAGGAAAATGCTTTGCTAAAGGGTTCTTTGGATGCCTTTGAAAAGAAGCATGCAGCTTTGGAGCTTGAGCTTATGAATGCTCAGAAAAGCTGCAATGAGACCGTTGAAAAATTAAGGGAGTTTGAGCAGAAGTGTTCTCAACTTGAGCGAAATGTGAAAAGCCTTGAGGAAAAGGTGTTGAGTTTAGAGGATGAAAATCATGTGCTTCGTCAGAAAGCCATTAGTGCTCCTCCTAAGAGCATTCGTCCAGGTCTTGCTAAGTCATTTTCAGAAAAACACTCAAGTTCAATAGCCTCTCGCACTGAGCGAAAACCCCTATTTGAGTCTCCTACACCTACAAAACATATTACCCCTTTTGCACTAGCCATGTCAGACTCTCATCGATCTAGGTTAACCACAGAGAGGAACCAGGATAACTATGAATTCCTCGCTAGGTGTATCAAAGAAAACTTGGGATTTAAAAATGGCAAACCTCTTGCAGCTCGTATCATATACAAAAGTCTTCTTCAATGGCATGCTTTTGAATTTGAGCGCACAACCATTTTTGATTACATAATTGAAGGCATAAATGAGGCTCTAAAGGTTAGAGATGATGGCTTTGTCTTGCCATATTGGCTGTCCAATACCTCTGCACTTCTATGCCTTTTACAGAGGAACATACGTTCAAATGGCTTTTTGACTACTGCTACTCAACGTCATGCTGGATCTCCTGGCTTGACCATCTGGACAGGGCATGGACTAAAATCCCCACTGAAGTCTCATGGATATGATGATGGTATGTCACATGTGGAGGCAAGATACCCAGCTATACTTTTTAAGCAACAACTAACTGCTTGTGTAGAGAAAATTTTTGGCCTTATACGTGACAATTTGAAAAAGGAACTTTCTCCACTTCTGGGATTATGTATTCAGGCACCCAAAACAGGAAGAGTGCATGGTGGAAAATCGTCTAGATCTCCTGGTGGGCTTCCTCAACAATCACCTGGTGGCCAGTGGGACAACATTGTCAACTTTTTGGATTCACTCATGAAGCAACTACGTGAAAATCATGTGCCATCATTCTTCATCCGTAAGCTAGTTACGCAAGTTTTTTCATTCATCAATATTACACTCTTTAACAGTCTTCTCCTGCGGCGTGAATGTTGCACATTTTCGAATGGTGAATATGTAAAGTCTGGTCTTGCAGAACTTGAGAAATGGATAGTCAATGCTAAGGAGGAGTATGCAGGAACATCCTGGCACGAGCTGAATTATATCAGACAAGCTGTTGGGTTCTTGGTAATACATCAGAAGAGGAGGAAATCGTTGAAAGAGATTCGACAGGATCTTTGTCCGGCATTAACAGTGAGACAAATCTATCGTATCAGTACCATGTACTGGGATGACAAGTACGGAACCCAGAGTGTGTCCAATGAGGTAGTTAGTGAAATGAGGGAACTTGTCAGCAAGGACAATCAAAATCTGGCCTCAAATTCTTTCTTGTTGGATGATGATCTGAGCATTCCTTTCTCTGCTGAAGACATAGATATAGCACTTCCTGCCATAGATCCTGATGATGTTGATCTTCCAGAATTTTTATCTGAATATCCTTGTGCCCAGTTTCTCATATCAAATCAAAAGTGA 4557 0.4084 MIFHKGSKVWVQDKDFVWVDAEVLDSSSNGTIHLVTVSGKTVVSSPEKLLPRDADEDEHGGVEDMTRLAYLNEPGVLYNLRRRYVLNDIYTYTGSILIAVNPFTNLPHLYETHMMEQYKGAPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTYVGGRAAGGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDAEKYKLAHPSHFHYLNQSKVYELDGVRNAEEYVNTRRAMDVVGISNEDQEAIFRVLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHMQMAANLFMCDVDLLLATLCTRSIQTREGSIVKALDCNAAVAGRDVLAKTVYARLFDWLVDKINRSVGQDTNSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPRSTHETFSTKLFHHCNSHPRLEKEKFSQTDFTMSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSLSKCPFVSGLFPLLAEEPSRSSYKFSSVASRFKQQLQALMETLKSTEPHYVRCVKPNSLNRPQMFENASVRHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRYGVIALEYMDGSYDDKVATEKILRMLKLENFQLGRTKVFLRAGQIGILDSKRAEVLDNAAKCIQRRLRTFVAHKHFISVRAAAVSLQACCRGCIAQNMYAAIREKAAVISIQKYIRMWLMSQAYLKLYSSAIIIQSHVRGFATRQRILHGREHKAATFIQACWRMSKVRSAFKQHQASILAVQCLWRCRQARKELRRLKQEANESGALRLAKSKLEKQLEELTWRLHLEKKIRVSNEEAKQAEISRLQKVIEALNLELDVAKLATINECNKNEVLQNQLKLSVKEKPTLERELFAMEEVRKENALLKGSLDAFEKKHAALELELMNAQKSCNETVEKLREFEQKCSQLERNVKSLEEKVLSLEDENHVLRQKAISAPPKSIRPGLAKSFSEKHSSSIASRTERKPLFESPTPTKHITPFALAMSDSHRSRLTTERNQDNYEFLARCIKENLGFKNGKPLAARIIYKSLLQWHAFEFERTTIFDYIIEGINEALKVRDDGFVLPYWLSNTSALLCLLQRNIRSNGFLTTATQRHAGSPGLTIWTGHGLKSPLKSHGYDDGMSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKTGRVHGGKSSRSPGGLPQQSPGGQWDNIVNFLDSLMKQLRENHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRRKSLKEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMRELVSKDNQNLASNSFLLDDDLSIPFSAEDIDIALPAIDPDDVDLPEFLSEYPCAQFLISNQK* 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0917 1518 Gene3D - 251 308 - -
Lan10g0917 1518 SMART iq_5 804 826 IPR000048 GO:0005515
Lan10g0917 1518 SMART iq_5 781 803 IPR000048 GO:0005515
Lan10g0917 1518 SMART iq_5 829 851 IPR000048 GO:0005515
Lan10g0917 1518 SMART iq_5 733 755 IPR000048 GO:0005515
Lan10g0917 1518 SMART iq_5 852 874 IPR000048 GO:0005515
Lan10g0917 1518 SMART iq_5 756 778 IPR000048 GO:0005515
Lan10g0917 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 784 IPR027417 -
Lan10g0917 1518 Gene3D Myosin VI head, motor domain, U50 subdomain 310 600 - -
Lan10g0917 1518 Pfam Myosin head (motor domain) 62 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan10g0917 1518 Gene3D - 733 783 - -
Lan10g0917 1518 Gene3D - 831 881 - -
Lan10g0917 1518 Gene3D - 784 830 - -
Lan10g0917 1518 Gene3D - 437 622 - -
Lan10g0917 1518 CDD MyosinXI_CBD 1112 1484 IPR037975 GO:0007015
Lan10g0917 1518 MobiDBLite consensus disorder prediction 1286 1307 - -
Lan10g0917 1518 ProSiteProfiles Dilute domain profile. 1161 1461 IPR002710 -
Lan10g0917 1518 SMART DIL_2 1336 1443 IPR002710 -
Lan10g0917 1518 CDD MYSc_Myo11 74 719 IPR036018 -
Lan10g0917 1518 ProSiteProfiles Myosin motor domain profile. 60 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan10g0917 1518 ProSiteProfiles IQ motif profile. 830 859 IPR000048 GO:0005515
Lan10g0917 1518 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 54 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan10g0917 1518 ProSiteProfiles IQ motif profile. 805 834 IPR000048 GO:0005515
Lan10g0917 1518 Coils Coil 866 886 - -
Lan10g0917 1518 Coils Coil 974 1050 - -
Lan10g0917 1518 PANTHER PROTEIN OPAQUE1-LIKE 3 1515 - -
Lan10g0917 1518 SMART MYSc_2a 54 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan10g0917 1518 MobiDBLite consensus disorder prediction 1051 1087 - -
Lan10g0917 1518 Gene3D Kinesin motor domain 63 661 IPR036961 -
Lan10g0917 1518 Pfam DIL domain 1337 1440 IPR002710 -
Lan10g0917 1518 Coils Coil 915 942 - -
Lan10g0917 1518 PANTHER MYOSIN 3 1515 - -
Lan10g0917 1518 ProSiteProfiles IQ motif profile. 758 785 IPR000048 GO:0005515
Lan10g0917 1518 Gene3D - 665 732 - -
Lan10g0917 1518 ProSiteProfiles IQ motif profile. 853 882 IPR000048 GO:0005515
Lan10g0917 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 880 IPR027417 -
Lan10g0917 1518 PRINTS Myosin heavy chain signature 90 109 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan10g0917 1518 PRINTS Myosin heavy chain signature 147 172 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan10g0917 1518 PRINTS Myosin heavy chain signature 195 222 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan10g0917 1518 PRINTS Myosin heavy chain signature 427 455 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan10g0917 1518 PRINTS Myosin heavy chain signature 480 508 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan10g0917 1518 Pfam IQ calmodulin-binding motif 807 824 IPR000048 GO:0005515
Lan10g0917 1518 Pfam IQ calmodulin-binding motif 831 851 IPR000048 GO:0005515
Lan10g0917 1518 Pfam IQ calmodulin-binding motif 784 802 IPR000048 GO:0005515
Lan10g0917 1518 SMART AAA_5 146 331 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0917 Lan-Chr10 13687848 13716350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0917 3 1514 Myosins gene family AT4G33200 71.844 0.0 2250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0917 K10357 - gmx:100790815 2584.29