Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0911 ATGGGTGGTTCAGGAAAATGGGTAAAAGCATTAATCGGGTTTAAGAAACCCGACAAACACGAACACACAAAGAGCAAGAAGTGGAGGCTATGGAGAAGTTCTTCAGGGGAAAATCACAAAGCAGCATCAGTATCAGGTTTTGAAGGATGTGATTCCCCAAAAAGTGTAGTAACTGATGCTTTTAATGCTGCAGTTGCCACTGTTATTCGAGCTCAACCTAAGGATTTTAAACTTGTTAGACAAGAATGGGCTGCTACAAGAATTCAAACTGCTTTCCGTGCCTTCTTGGCTAGAAGGGCTTTGAAAGCATTGAAGGGAGTTGTCAAGCTTCAGGCTCTTGTTCGAGGTCGACAGGTGAGGAAGCAGGCTGCAGTGACATTGAGGTGCATGCAGGCCCTAGTTCGTGTTCAAGCACGAGTAAGAGCTCGTCGTGTGCGCATGTCCATAGAGGGGCAAGCAGTGCAGGAAATGCTCAATCAAAGGCGCACCAAGGCTGATCTCTTGAAAGAAGCTGAGGAAGGGTGGTGTGATAGCAAAGGAACATTGAAAGATGTTAAAACAAAATTACAGATGAGGCAAGAAGGAGCTTTCAAGAGGGAAAGAGCAATTGCATACTCTCTAGGTCACAAGCAATGGAGATCAACTCCCATCTCTAATTCAAGACCAAACACCTCACTTTCCACACTCAATAAGTATGAGATTGACAAGGTTAATGGGGGATGGAGTTGGTTAGAACGTTGGATGGCGGCTAAGCCTTGGGAGACTAGATTAATGGAACAAGCTCATGCTGATGCCTCGGCTAAAACCCCTCCACCGGCAAAGAAAAGTGCGCTGAAGTCTTCAAATTCAAAAAAATCAGAACCATGCTTAGTCAAAGTCAGAAAGAACAATGTCACTACAAGGATTTCTGCTAGACCTCCACATATTGGGCAAGCTACTCGTTCATCCTCGAGCCCGAGTTCTGAGTTTCAGTATGATGAGAGCTCTGCTTCATCTTCAATTTGCACATCCATAACGCCAACATCTGGGAATGCTGCTTGTGAAAACCGGATAGAGGATAGTAGTAGTAACACTAAGCCAAGTTACATGAACCTGACTGAATCAACTAAGGCGAAGAAAAAAACGTATAATCATCAATACAATAGAACTCAAAGGCAGCAGTCCATGGATGAGTTTCAGTTTCTCAAAAGGACAGCTGTTTTCTCTAATGGCGATTCCAAAATCAACGCTGCTCCTGATCCTTCAATCAACTTTTCTAGGCCACTTTATTTACCGACCTACTTGGATAAGAGCTCAGTGAAGCAACACTGA 1311 0.4401 MGGSGKWVKALIGFKKPDKHEHTKSKKWRLWRSSSGENHKAASVSGFEGCDSPKSVVTDAFNAAVATVIRAQPKDFKLVRQEWAATRIQTAFRAFLARRALKALKGVVKLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQEMLNQRRTKADLLKEAEEGWCDSKGTLKDVKTKLQMRQEGAFKRERAIAYSLGHKQWRSTPISNSRPNTSLSTLNKYEIDKVNGGWSWLERWMAAKPWETRLMEQAHADASAKTPPPAKKSALKSSNSKKSEPCLVKVRKNNVTTRISARPPHIGQATRSSSSPSSEFQYDESSASSSICTSITPTSGNAACENRIEDSSSNTKPSYMNLTESTKAKKKTYNHQYNRTQRQQSMDEFQFLKRTAVFSNGDSKINAAPDPSINFSRPLYLPTYLDKSSVKQH* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0911 436 PANTHER IQ-DOMAIN 5-RELATED 1 435 - -
Lan10g0911 436 Gene3D - 79 128 - -
Lan10g0911 436 ProSiteProfiles IQ motif profile. 81 109 IPR000048 GO:0005515
Lan10g0911 436 SMART iq_5 103 124 IPR000048 GO:0005515
Lan10g0911 436 SMART iq_5 80 102 IPR000048 GO:0005515
Lan10g0911 436 Pfam IQ calmodulin-binding motif 83 102 IPR000048 GO:0005515
Lan10g0911 436 Pfam IQ calmodulin-binding motif 105 122 IPR000048 GO:0005515
Lan10g0911 436 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 435 - -
Lan10g0911 436 MobiDBLite consensus disorder prediction 260 361 - -
Lan10g0911 436 ProSiteProfiles IQ motif profile. 105 132 IPR000048 GO:0005515
Lan10g0911 436 MobiDBLite consensus disorder prediction 296 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0911 Lan-Chr10 13597657 13600238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0911 1 430 IQD Protein Family AT2G26180 59.502 1.38e-145 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0911 - - qsu:112015613 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0911 10 13597657 13600238 Lan15g1108 15 19940397 19943655 PCT
Lan10g0911 10 13597657 13600238 Lan14g0859 14 15267104 15269876 PCT
Lan15g1108 15 19940397 19943655 Lan10g0911 10 13597657 13600238 PCT
Lan14g0859 14 15267104 15269876 Lan10g0911 10 13597657 13600238 PCT