Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0876 ATGAAAGAAGAATCAACAGGACTAATCATTGGGATTTCAATAGGTGTGGTTATTGGAGTTGTTTTAGCAATTACTGCATTGTTCTGTCTTAGATATCATCGGAAGCTTTCACAGATAGGCAATAGCAGTTCCCGGAGGGCTGCTACGATTCCTATTCGCGCAAATGGTGCTGATTCATGTACTATTCTATCAGACTCAACCTTAGGTCCAGAGTCACCTGTGAAGTCAGGACGAAATGGCATGTCCTTCTGGCTTGATGGATTTAAGAAGAGTAATGTGGTTTCAGCATCTGGAATACCAGAATATTCATACAAGGATTTGCAGAAGGCGACATGCAACTTCACAACTCTCATAGGACAAGGAGCATTTGGTCCTGTTTATAAAGCTCAGATGTCAACTGGGGAGATTGTTGCAGTAAAAGTTCTAGCAACTAATTCTAAACAAGGGGAGAAAGAATTCCAGACAGAGGTTATGTTGCTGGGAAGGTTACACCATAGAAACTTGGTCAATTTGGTTGGATATTGTGCTGAAAAGGGGCAACATATGCTTATATATGTCTACATGAGTAAAGGCAGCTTGGCTTCTCACTTGTACAGTGAAGAAAATGGGGCACTAGGCTGGGATTTGAGGGTTCATATAGCTTTAGATGTAGCAAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCTCCTGTTATCCATAGAGATATCAAATCTTCCAATATTCTCTTGGATGAATCCATGCGAGCCAGGGTTGCTGATTTTGGGCTTTCAAGAGAAGAAATGGTGGATAAACATGTAGCTATTAGGGGTACCTTTGGCTATCTTGACCCTGAGTATATATCTTCAGGGACATTCACTAAGAAAAGTGATGTATATAGTTATGGAGTATTGCTCTTTGAACTTATAGCTGGCCGAAATCCGCAGCAGGGTCTTATGGAATACGTCGAACTTGCAGCAATGAACACAGAGGGAAAAGTTGGTTGGGAAGAAATTGTTGATTCTAGGCTCGAGGGAAAATGTGAGTTCCAAGAGCTTAATGAAGTGGCTGTCCTTGCCTACAAATGTATCAACCGTGCCCCACGGAAGCGCCCTTCCATGAGGGACATAGTGCAAGTGTTGACAAGGATCCTTAAATCAAGGCACCATAGGAATAATCATAACAAGTCCTTGTCAGCAACAGCAGATGAAGTTTCCATTGATGTTGATCACACAGAAAACAAGAATTATGTAACTGAACACAGGAGAGATGAATCTATGGATAGTGCAGCTGACATGGATGATTTGTAG 1290 0.4194 MKEESTGLIIGISIGVVIGVVLAITALFCLRYHRKLSQIGNSSSRRAATIPIRANGADSCTILSDSTLGPESPVKSGRNGMSFWLDGFKKSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGEIVAVKVLATNSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLIYVYMSKGSLASHLYSEENGALGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDESMRARVADFGLSREEMVDKHVAIRGTFGYLDPEYISSGTFTKKSDVYSYGVLLFELIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSRLEGKCEFQELNEVAVLAYKCINRAPRKRPSMRDIVQVLTRILKSRHHRNNHNKSLSATADEVSIDVDHTENKNYVTEHRRDESMDSAADMDDL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0876 429 Gene3D Transferase(Phosphotransferase) domain 1 188 402 - -
Lan10g0876 429 CDD STKc_IRAK 118 377 - -
Lan10g0876 429 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 404 - -
Lan10g0876 429 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Lan10g0876 429 MobiDBLite consensus disorder prediction 404 429 - -
Lan10g0876 429 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0876 429 SUPERFAMILY Protein kinase-like (PK-like) 100 387 IPR011009 -
Lan10g0876 429 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0876 429 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Lan10g0876 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Lan10g0876 429 MobiDBLite consensus disorder prediction 404 422 - -
Lan10g0876 429 PANTHER OS01G0253100 PROTEIN 5 404 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0876 Lan-Chr10 13024167 13028199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0876 24 374 Glycoside Hydrolase AT3G07070 38.919 1.14e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lan10g0876 PK_Tyr_Ser-Thr 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0876 - - gmx:100799586 750.355