Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0874 ATGGACTCGCAGCGGATTTTCAGTTACAATTTGACAAGTGCAGGACTACCTTACATGTCATCTTTTCCCACTATTCAATCACTACCCAACAGTTTTGGATCCTTGAATTTTGACATAGGGAACTCCCCTAATTCACCGTTTTCCACTTATTTTGATTCTGATACATTTTCTGCATTGAGTGGCAGCCCCGAGCAGCAGAACAGCCCTTCGAGAATCATATCAGGTGTAAGCCTGTCTTGTAACTCTTCACTTGAAACCAATCATTATCCGCAGAGGTCAATCTCATCTGTGGACAGTATTAATGACAGTTTGCAACTATATTCTGCTAGGAGCTCTCTCCTACAGAATGCAAATTGGAATCACAAAATCCAACATGCATTGTTGGAACTCGAAAGCGCTCTGATGGCCCCCGATGATGATGAAGTTACCACATCAAAGACTTCTTGGAGCAATGAGCACCAGGGTTCACAATATATTCAAACTCAGCCATCTTATGTAACTAGCTGTAGGCAATCAAGTGATGTTGTACATGCATCGAAACGACAAAAATCAATGGAGGAAGTACAGCTGCAAGGGTTTCCATCAAGCAACTTGAAACAACTGCTGATTGCTTGTGCCAAAGCCCTGTCTGAAAACAACATGAGAGGTTTTGATCAATTGATAGTAAAGGCTAGAAGTGCTGTGTCTGTTAGTGGTGAGCCGATCCAGCGGCTTGGTGCTTATATGGTAGAAGGGCTTGTTGCAAGGACGGAAGCATCAGGGAGTAGCATCTATCGCGCCCTTAGGTGCAAAGAGCCTGAAAGCGAAGAATTACTCTCGTACATGCAAATGTTGTTTGAAATCTGCCCGTACTTAAAATTTGGTTACATGGCTGCCAATGGTGCTATTGCTGAAGCATGCAAAAATGAGGATCGAATTCACATCATAGACTTTCAGATTGCTCAGGGAACTCAGTGGATGACTCTTCTTCAAGCTCTTGCAGCAAGACCTGGTGGAGCTCCCCATGTGAGGATCACAGGGATTGATGACCCTGTTTCTAAATATGCTCGTGGCGATGGACTAGAGATAGTTGGGAAAAGACTGGCCACGATGTCCAAGAAATTCGGGATCCCGGTTGAGTTTCATGGAGTGCCTGTTTTTGCTCCAGATGTAACAAGAGATATGCTTGATATCAGGCCTGGAGAGGCTTTGGCTGTGAACTTTCCCTTGCAACTCCACCACACTGCTGATGAGAGTGTTGATTTGAGTAACCCAAGGGATGGGCTTCTGAGATTAGTCAAATCACTTTCTCCCAAGGTTACCACATTGGTGGAGCAGGAATCGAACACGAACACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTAGATTACTACTTGGCGATCTTCGAATCCATCGATGTCACTCTCCCGAGAAGTAGCAAAGAGCGGATTAACGTGGAGCAACATTGTCTCGCTCGCGATATTGTGAACATTATTGCTTGCGAAGGGAAGGAAAGGCTAGAGAGGCATGAATTGTTCGGCAAGTGGAAGTCTAGGTTGACAATGGCCGGATTCCGTCAATCTCCATTGAGCTCTTATGTGAATTCTGTTATAGGAAGCCTCCTGGGGTGCTATTCAGAACATTATACACTAGTGGAGAAGGATGGGGCCATGTTGTTGGGGTGGAAGAACAGAAATTTGATATCAGCTTCAGCCTGGTATTGA 1707 0.447 MDSQRIFSYNLTSAGLPYMSSFPTIQSLPNSFGSLNFDIGNSPNSPFSTYFDSDTFSALSGSPEQQNSPSRIISGVSLSCNSSLETNHYPQRSISSVDSINDSLQLYSARSSLLQNANWNHKIQHALLELESALMAPDDDEVTTSKTSWSNEHQGSQYIQTQPSYVTSCRQSSDVVHASKRQKSMEEVQLQGFPSSNLKQLLIACAKALSENNMRGFDQLIVKARSAVSVSGEPIQRLGAYMVEGLVARTEASGSSIYRALRCKEPESEELLSYMQMLFEICPYLKFGYMAANGAIAEACKNEDRIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGDGLEIVGKRLATMSKKFGIPVEFHGVPVFAPDVTRDMLDIRPGEALAVNFPLQLHHTADESVDLSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRSSKERINVEQHCLARDIVNIIACEGKERLERHELFGKWKSRLTMAGFRQSPLSSYVNSVIGSLLGCYSEHYTLVEKDGAMLLGWKNRNLISASAWY* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0874 568 ProSiteProfiles GRAS family profile. 189 568 IPR005202 -
Lan10g0874 568 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 27 568 - -
Lan10g0874 568 Pfam GRAS domain family 198 567 IPR005202 -
Lan10g0874 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 27 568 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0874 Lan-Chr10 12969006 12972026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0874 127 567 GRAS Transcription Factor Family AT1G50600 56.689 7.29e-177 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan10g0874 GRAS 2.8e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0874 - - gmx:100799073 902.508