Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0858 ATGTCCAAAAAGTTCATTTATTTTCCAATTTCATCAGCTAAATTTGTTCAATATGGTGTGCATGTTTTGAAGTTTATGTTATTGAACCTTGTTTATAGAAGAACTACAAAGATTAACGTTAACAACACTGAAGATACTAACAACGTTTTCAACAAGATGCCAAGCTATGCACCTTCATTGCCTTCTTCTAATTCCATGGGCATCGAAGAAAACAATGTCCATCCTTCTCGAATTTCTGATTTTGGTGCTCTTGAGCAATCTCTTGGATTTCATGTTGAGGATACTATCAATCATAGCAGAAATCCAGTGTTTAGTCAGATGAAATCAAATAGCCAAGCTCTAGGTGCTGATGTTCAATTTGGTGCTTTGAATAAGTCATTTGCAACCCCGGATATTGACCTCTCCGCTGCAATTGCTGGGACTCAGACATTTGCACGGCAAAGAGACTCCCAACTAAATCTGACTCCGATGTCTGGTGGTCATCGTGAGAACTGGGGAGAGTCCAACATGGCAGATGCAAGCGCTGATACTTCAACGGATGATACAGATGATAAAAGTCAAAGGGCTGAAAGAGGTGAATCCAGTGATAGATCAAAAGATAAATCAGATCAGAAGACACTACGACGGCTAGCTCAAAATCGCGAGGCTGCCAGAAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGTAGTAGGCTGAAACTTACCCAACTTGAGCAGGAACTCCAGCGAGCCCGCCAGCAGGGAATATTTATTTCAAACACAGGAGACCAGGCCCATTCAATGAGCGGAAATGGTGCTATGGCATTTGACGTAGAATATGCACGATGGTTAGAAGAGCATAATAGGCACACCAATGAGCTAAGGGCTGCAATAAATTCTCATGCCGGAGACATTGAACTTCGTACCATTGTCGACAATTTCATGACACAATTTGATGGTATCTTCAGGCTGAAAGGTGTTGCAGCAAAAGCTGACATTTTCCACATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGCGATGTTTCTTGTGGATTGGAGGTTTTCGTTCATCCGAGCTTCTCAAGCTTCTTGTAAATGAATTGGAGCCTTTAACTGAGCAACAAGTGATGGGTATATACAACTTGCAGCAGTCATCCCAGGAAGCAGAAGATGCTTTGTCCCAAGGAATGGATGCATTGCAACAATCACTAGCCGAGACATTGGCTAATGGTTCACCCAACTCTTCAGCCTCTTCAGGGAATGTGGCGAATTATATGGGACAAATGGCTGTGGCCATGGGTAAACTTGGTAGTCTCGAGGGCTTTCTTCGTCAGGCTGATAATCTGCGGCAGCAAACATTACAACAAATGCTTCGGATATTAACAACCAGGCAATCAGCCCGAGCTCTCCTTGCAATTAGCGATTACTTCTCCCGGCTGCGAGCCTTAAGTTCTCTATGGCTTGCCAGGCCAAGGGACTAA 1473 0.4352 MSKKFIYFPISSAKFVQYGVHVLKFMLLNLVYRRTTKINVNNTEDTNNVFNKMPSYAPSLPSSNSMGIEENNVHPSRISDFGALEQSLGFHVEDTINHSRNPVFSQMKSNSQALGADVQFGALNKSFATPDIDLSAAIAGTQTFARQRDSQLNLTPMSGGHRENWGESNMADASADTSTDDTDDKSQRAERGESSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISNTGDQAHSMSGNGAMAFDVEYARWLEEHNRHTNELRAAINSHAGDIELRTIVDNFMTQFDGIFRLKGVAAKADIFHILSGMWKTPAERCFLWIGGFRSSELLKLLVNELEPLTEQQVMGIYNLQQSSQEAEDALSQGMDALQQSLAETLANGSPNSSASSGNVANYMGQMAVAMGKLGSLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRD* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0858 490 Pfam Seed dormancy control 287 362 IPR025422 GO:0006351|GO:0043565
Lan10g0858 490 SUPERFAMILY Leucine zipper domain 205 248 IPR046347 GO:0003700|GO:0006355
Lan10g0858 490 CDD bZIP_HBP1b-like 205 256 - -
Lan10g0858 490 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 208 223 IPR004827 GO:0003700|GO:0006355
Lan10g0858 490 PANTHER TRANSCRIPTION FACTOR TGA9 93 490 - -
Lan10g0858 490 ProSiteProfiles DOG1 domain profile. 270 487 IPR025422 GO:0006351|GO:0043565
Lan10g0858 490 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 203 247 IPR004827 GO:0003700|GO:0006355
Lan10g0858 490 Gene3D - 204 257 - -
Lan10g0858 490 Pfam Basic region leucine zipper 201 247 IPR004827 GO:0003700|GO:0006355
Lan10g0858 490 SMART brlzneu 201 264 IPR004827 GO:0003700|GO:0006355
Lan10g0858 490 MobiDBLite consensus disorder prediction 178 207 - -
Lan10g0858 490 Coils Coil 224 251 - -
Lan10g0858 490 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 93 490 - -
Lan10g0858 490 MobiDBLite consensus disorder prediction 149 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0858 Lan-Chr10 12667661 12674457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0858 170 490 bZIP Transcription Factor Family AT3G12250 74.018 6.69e-170 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan10g0858 DOG1 8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0858 K14431 - gmx:778136 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0858 10 12667661 12674457 Lan3g0594 3 6944331 6951165 LSH