Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0848 ATGGGACTGTGTCATGGAAAACCAATTGAAACCTCACAAACTCAAAGAGAAAACCAATCATTCCAAAATGATAAAGAGGTTGTTTTACCACTACCACCAAGATCTTCATCAAAATTTCCATTTTATAGCCCAAGCCCTTTGCATAAATTCTTCAAAAACTCACCTTCAAACTCCACTCCCTCTAGTGTGAGTTCAACCCCTCTGCGCCTCTTCAAGAGGCCTTTCCCTCCTCCTTCACCAGCAAAGCACATAAGGGCATTGCTCGCGAGGCGCCACGGTTCTGTGAAGCCTAACGAGGCCACAATCCCTGAAGGGAGTGAATGTGAGGTTGGTTTGGATAAGAGTTTTGGGTTTTCTAAGGAGTTTGAGGTTCATTATGAGCTTGGAGAAGAGATTGGGCGTGGCCATTTTGGATATACTTGCTCTGCAAAGGGTAAGAAGGGAAGCTTGAAGGGCCAGGAGGTTGCTGTTAAAGTCATTCCAAAATCCAAGATGACAACAGCAATTGCTATAGAGGATGTAAGGAGAGAAGTAAAGATATTACGAGCTCTAACTGGGCATAAGAATTTGGTGCAATTCTATGAAGCTTATGAGGATGACAACAATGTTCATATAGTTATGGAGCTATGCAAAGGAGGTGAACTTCTGGATAAGATCCTTTCCAGGGGTGGAAAGTACCCAGAGGAGGATGCCAAGGATGTTATGATTCAGATATTAAATGCGGTAGCTTTCTGTCATCTACAGGGTGTTGTTCACCGTGATCTGAAGCCAGAGAACTTTCTTTTTACTTCTAAGGATGACAATTCCACTCTGAAGGCCATTGATTTTGGACTGTCTGACTATGTAAAACCAGATGAAAGGTTGAATGATATTGTGGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCTTATGGAACGGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATCCTTTTATGTGGAAGCCGACCCTTCTGGGCCCGGACAGAATCTGGCATATTTCGTGCTGTTTTGAAGACAGATCCAAGTTTTGATGAAGGCCCTTGGCCTTCTTTATCAGCTAATGCTATTGATTTTGTTAAGAGACTTTTGAACAAGGATTATCGCAAAAGATTAACTGCAGCACAGGCTCTCAGTCACCCGTGGCTAGCAAATCACTCTGATGATATAAGGATACCCTTTGATATGATAATCCCGAAGCTTATTAAAGCTTACATATGCTCATCTCCTTTATGCAAAACAGCATTAGGGGCTCTTGCAAAGACATTAACGTTAGTGCAACTAGCTTATCTCAAAGAACAATTTACTCTTTTAGGACCAAACAAAAGTGGGTTAATCTCTATGCAGAACTTCAAGATGGCTGTTTTAAAGAGTGCCACTGATGCCTCAAAGGAATCGCGGGTCTTGGATTATGTAAACACGTTTAGTTCAATCCAATATCGGAAATTGGACTTTGAGGAATTTTGTGCTGCTTCGATAAGTGTGCATCAACTAGAGGGAATGGAGAGCTGGGAGCAACACGCAAGGACTGCTTATGACCTGTTTGAAAAGGATGGAAATAGACCAATTATGGTCGAAGAGCTTGCCTCGGAACTTGGGCTTAGTCCATCAGTGCCTGTTCATGTGGTACTCCAAGATTGGATAAGACACTCGGATGGGAAGCTTAGTTTCTTGGGGTTTGTCCGACTTCTGCACGGAGTTTCTTCACGCACACTTCAGAAAGCTTGA 1743 0.4251 MGLCHGKPIETSQTQRENQSFQNDKEVVLPLPPRSSSKFPFYSPSPLHKFFKNSPSNSTPSSVSSTPLRLFKRPFPPPSPAKHIRALLARRHGSVKPNEATIPEGSECEVGLDKSFGFSKEFEVHYELGEEIGRGHFGYTCSAKGKKGSLKGQEVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDNNVHIVMELCKGGELLDKILSRGGKYPEEDAKDVMIQILNAVAFCHLQGVVHRDLKPENFLFTSKDDNSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKTDPSFDEGPWPSLSANAIDFVKRLLNKDYRKRLTAAQALSHPWLANHSDDIRIPFDMIIPKLIKAYICSSPLCKTALGALAKTLTLVQLAYLKEQFTLLGPNKSGLISMQNFKMAVLKSATDASKESRVLDYVNTFSSIQYRKLDFEEFCAASISVHQLEGMESWEQHARTAYDLFEKDGNRPIMVEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTLQKA* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0848 580 Gene3D Transferase(Phosphotransferase) domain 1 216 401 - -
Lan10g0848 580 SMART serkin_6 126 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0848 580 PANTHER CDPK-RELATED KINASE 1 27 575 - -
Lan10g0848 580 ProSiteProfiles Protein kinase domain profile. 126 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0848 580 Pfam Protein kinase domain 126 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0848 580 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 575 - -
Lan10g0848 580 Gene3D - 408 571 - -
Lan10g0848 580 ProSitePatterns Protein kinases ATP-binding region signature. 132 158 IPR017441 GO:0005524
Lan10g0848 580 MobiDBLite consensus disorder prediction 1 31 - -
Lan10g0848 580 MobiDBLite consensus disorder prediction 8 25 - -
Lan10g0848 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Lan10g0848 580 SUPERFAMILY EF-hand 420 571 IPR011992 -
Lan10g0848 580 Gene3D Phosphorylase Kinase; domain 1 119 215 - -
Lan10g0848 580 SUPERFAMILY Protein kinase-like (PK-like) 125 414 IPR011009 -
Lan10g0848 580 CDD STKc_CAMK 125 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0848 Lan-Chr10 12519640 12526198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0848 34 578 EF-hand Containing Proteins AT3G50530 70.568 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan10g0848 Pkinase 3.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0848 - - gmx:100796678 974.156