Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0840 ATGAAGTCTTTATCACTGGATCACTGGAGGAGTTACTTCCGTTCTGCGAATTCTGATATATTTGAGATAATTGACCATGCTATCATGGTGGCTGCTTCTGATTGTCCTAAAGAGTTCAGGTTGAGAAGGGATGGAATTGCAGAGAGGTTGTTCTCTTGCAAGTTGACTCGTTGCGTTGGGTGTGATATGGTGGAGTTGGCTGTGTCTGCCGATGATGGTGATGATGAACATAATGATGATGATGATGATAGAGATAATGATGGTGTTGAGTTTGAGGCAGGTGCAAGCAAAGAGAGCAAGGTTAATTGTAGCAGAGAGGATCATGGAGATATGGATGTGAACCGTGTTAGCAATTTTAGCTTTGGAGATGCCGAGGCATTAACTGATGAGATTGAAGAAGAGTCTCAATATGTTGGTGAAGTTTTGAGAATCAAAGACATTCTCCTTCACCGTGAAGAACAATCTGACTCTGTGTTATTTGAGTCATTGAGGAGGCTGCAGCTGATGGAACTCACTGTGGATCGTCTAAAGGCTACTGAGATTGGAAAGGCTGTCAATCCTCTACGAAAGCATGGATCAAAGGAAATTCGACAACTTGCACGAACTCTTATCGATGACTGGAAAGAGTTGGTTGATGAGTGGGTCAGGGCTACCCCTACTACTGATATTGCAGCTTCAGAAGGCACTCCAGATTCAGTAAATCCTTCCGTTGTTGATGATGAAGAAGAAGGACTTCCATCACCTCCTATGGATGAAGGAGCTTTTTTTGTTGCTCAAGCTGGTTCGATAGAACTTTCACAGTTCTTCGATGGCATAGATGATTATGGAAATCCTCGTCAGAGTGGACAATTCAGCGGGAACCGTGAAAATCGCAGAAAGCCATCTGTGAACAGTCACACTATAGAAAAGAGAAAATTGCAAGCTTCAAACGAGGAAAGGATCAATAACAAGGATAGCAAGAGTCAGCAATCCAAGAAAAATGAGGTTGCTTTGAGGTTAAATAATCATGTAACTACAGATTCTGGCCTAGGTACACCACCAAAATCAAGTATGCAGCGAAAAAGCAATGTTGAGCCGAAGATGCAGCAAAAAATAGAAAACAGTACTCTTGCAAAGAGGCCACCCATCGGTCAGCAAGATAAACCCAAGTATTCGGACGATGCTGCTGTCCAAGTGAAGCTAGAAGCCACAAAGAGGAAACTTCAAGAGCGTTATCAACAAGCTGAAAATGCTAAGAGACAGCGTACAATACAAGTTATGGAATTAAACGAACTCCCGAAGCAAGCGGCTGTCCAGAGAAATCCACATTTCAAACCTGGAAATCACAATAGGCACTGGGGGGCTAATGCACGACGATAG 1359 0.4305 MKSLSLDHWRSYFRSANSDIFEIIDHAIMVAASDCPKEFRLRRDGIAERLFSCKLTRCVGCDMVELAVSADDGDDEHNDDDDDRDNDGVEFEAGASKESKVNCSREDHGDMDVNRVSNFSFGDAEALTDEIEEESQYVGEVLRIKDILLHREEQSDSVLFESLRRLQLMELTVDRLKATEIGKAVNPLRKHGSKEIRQLARTLIDDWKELVDEWVRATPTTDIAASEGTPDSVNPSVVDDEEEGLPSPPMDEGAFFVAQAGSIELSQFFDGIDDYGNPRQSGQFSGNRENRRKPSVNSHTIEKRKLQASNEERINNKDSKSQQSKKNEVALRLNNHVTTDSGLGTPPKSSMQRKSNVEPKMQQKIENSTLAKRPPIGQQDKPKYSDDAAVQVKLEATKRKLQERYQQAENAKRQRTIQVMELNELPKQAAVQRNPHFKPGNHNRHWGANARR* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0840 452 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 137 220 IPR035441 -
Lan10g0840 452 ProSiteProfiles TFIIS N-terminal domain profile. 139 214 IPR017923 -
Lan10g0840 452 CDD TFIIS_I 140 212 - -
Lan10g0840 452 MobiDBLite consensus disorder prediction 326 374 - -
Lan10g0840 452 MobiDBLite consensus disorder prediction 221 253 - -
Lan10g0840 452 MobiDBLite consensus disorder prediction 71 107 - -
Lan10g0840 452 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 130 223 IPR035441 -
Lan10g0840 452 MobiDBLite consensus disorder prediction 89 107 - -
Lan10g0840 452 MobiDBLite consensus disorder prediction 269 387 - -
Lan10g0840 452 MobiDBLite consensus disorder prediction 430 452 - -
Lan10g0840 452 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 451 - -
Lan10g0840 452 MobiDBLite consensus disorder prediction 292 325 - -
Lan10g0840 452 Pfam TFIIS helical bundle-like domain 163 211 IPR017923 -
Lan10g0840 452 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 451 IPR044805 -
Lan10g0840 452 MobiDBLite consensus disorder prediction 71 88 - -
Lan10g0840 452 SMART TFS2_5 138 213 IPR003617 GO:0005634
Lan10g0840 452 Coils Coil 391 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0840 Lan-Chr10 12360422 12364683 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lan10g0840 Med26 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0840 - - gmx:100799367 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0840 10 12360422 12364683 Lan3g0614 3 7452029 7456357 LSH