Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0835 ATGGCTTCAAGACCCATCGTTCCGATTCATCAACAACAAGTCAGAGGAGGAGGGAAGCAGAAGAAAAATGTTGCAGCAGATGGAAAGAACAGAAGAGCACTTGGTGACATAGGAAACTTGGATCGCGTTAAAGGTGTTGAGATCAAACCTAATAGACCCATCACAAGGAGTTTTTGTGCACAGCTACTTGCCAATGCACAAGCTGCAGCTGTTGTTGAAAATAACAAGAAATTGACTATTCCTAATGTGGGTGGTCCAAAGCCTAATGTTGCTGAAGGAGCTGTTGCTAAAAGGGTTGCACCAAAGCCCGCCGAGAAGAAAGTCGTTGCAAAACCAAAGCCTCAAGATGTCGTCGAAATCAGCCCAGATGAAGAGGTCCAGAAAAACAAGTCTGTGGCCAAGAAAAAGGAAGGAGGAGACAACAAAAAGAAACCACAAACACTTAGTTCAGTCCTCACTGCTAGAAGCAAGGCAGCATGTGGTTTGACTAAGAAACCAAAGGAGCAGATTATTGACATTGATGCTGATGATTCTGGCAACGAACTCGCCGCTTTGGAGTATATTGAAGACATTTACAAGTTTTATAAGCTGGAAGAGGTCGAGAGCCGCCCGTATCAATATATGGACTCACAACCTGAGATAAATGAGAGGATGAGAGCCATATTGGTTGATTGGTTGATAGATGTGAACAACAAATTTGACCTTTCACTTGAAACCCTTTACTTGACTATCAATATAGTTGATAGATTCCTAGCAGTTAAGGTTGTGCCAAGAAGGGAATTGCAATTACTCGGCATCAGTGCCATGCTCTTGGCATCAAAGTATGAAGAAATCTGGCCCCCTGAGGTGAATGACTTTGTGTGCCTCTCAGATAGAGCATACACTCATGAACAGATACTAGTGATGGAGAAAATCATCCTCGGAAAGCTGGAATGGACATTGACTGTGCCTACACCTTATGTTTTCTTGGTTCGCTTTATAAAGGCATCGGTTCCTGACCAAGAGTTGGAAAACATGTCTCATTTTCTTTCGGAGTTGGGAATGATGCAGTATTCTACCTTAATGTTCTGTCCATCAATGGTTGCTGCCTCAGCAGTATTTGCAGCTAGATGCACTTTAAATAAGACCCCCTTTTGGAATGAGACGCTTAAGCTACACACTGGTTACTCAGAAGAACAGCTCATGGATTGTGCAAAGCTATTGGTGAGTTTTCATTCCACAATTGGGGGAGGGAAGCTTAAAGTTGTGCATAGGAAATACTCTGATCCACAGAAAGGAGCTGTTGCTGTGTTTCCACCAGCAAAATATCTCATGCCTGAGAGTTCTTCTGGCACTAGAGTTTGA 1344 0.4308 MASRPIVPIHQQQVRGGGKQKKNVAADGKNRRALGDIGNLDRVKGVEIKPNRPITRSFCAQLLANAQAAAVVENNKKLTIPNVGGPKPNVAEGAVAKRVAPKPAEKKVVAKPKPQDVVEISPDEEVQKNKSVAKKKEGGDNKKKPQTLSSVLTARSKAACGLTKKPKEQIIDIDADDSGNELAALEYIEDIYKFYKLEEVESRPYQYMDSQPEINERMRAILVDWLIDVNNKFDLSLETLYLTINIVDRFLAVKVVPRRELQLLGISAMLLASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKIILGKLEWTLTVPTPYVFLVRFIKASVPDQELENMSHFLSELGMMQYSTLMFCPSMVAASAVFAARCTLNKTPFWNETLKLHTGYSEEQLMDCAKLLVSFHSTIGGGKLKVVHRKYSDPQKGAVAVFPPAKYLMPESSSGTRV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0835 447 MobiDBLite consensus disorder prediction 1 30 - -
Lan10g0835 447 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 19 440 - -
Lan10g0835 447 SMART Cyclin_C_2 317 434 IPR004367 -
Lan10g0835 447 SMART cyclin_7 321 403 IPR013763 -
Lan10g0835 447 SMART cyclin_7 224 308 IPR013763 -
Lan10g0835 447 Pfam Cyclin, N-terminal domain 190 314 IPR006671 -
Lan10g0835 447 PIRSF Cyclin_A_B_D_E 4 446 IPR039361 -
Lan10g0835 447 SUPERFAMILY Cyclin-like 180 314 IPR036915 -
Lan10g0835 447 Gene3D - 204 309 - -
Lan10g0835 447 MobiDBLite consensus disorder prediction 102 150 - -
Lan10g0835 447 CDD CYCLIN 315 402 IPR013763 -
Lan10g0835 447 MobiDBLite consensus disorder prediction 102 143 - -
Lan10g0835 447 Pfam Cyclin, C-terminal domain 317 433 IPR004367 -
Lan10g0835 447 ProSitePatterns Cyclins signature. 219 250 IPR006671 -
Lan10g0835 447 CDD CYCLIN 218 307 IPR013763 -
Lan10g0835 447 SUPERFAMILY Cyclin-like 316 436 IPR036915 -
Lan10g0835 447 Gene3D - 310 441 - -
Lan10g0835 447 PANTHER CYCLINS 19 440 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0835 Lan-Chr10 12236660 12239475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0835 1 395 Core Cell Cycle Gene Families AT3G11520 59.343 1.73e-147 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0835 K21777 - gmx:547919 608.986