Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0834 ATGTCTTCAAGTTCAAAACATAAGAAGCATTCCAAGTCGCACTCAAGAGCATCATCATTATTATCCACTCCTGAACCAAACACACCTTCTGAAAACGACGACGTTCAACAACTTGCTTCTTTCTGCGAACATGCTTCTACAAAATTCCCTTCTTTCATTTCAAAATCAAGTTTTTTCGGCAAAATCACTGATTTTGAAACTTCTCATGATTCTAAGGGGTGCAGAATTTGGCTTTCTGAGCCTTCTATGGTTTCTTATTCTCTTAGCCCTGGTTCTATTGTCTCGGTGTCAATAGCTTCTTCAGGGAGGAAAAATGTGCAATTGGATAGCTTTCCTCTTAAATCATTAGTTAATGAATGTGCCAGATGCTATGGGTTGGAAAATGGGAAGACATTGGATGATGAAGCTGGAAACTACTTTGCACTTGCAACAGTTTTTCCTTCTAGTAAGGTTTTGAAGAATGGAGTTCGACTATCTTCAAATCTTTCTTATACCATGGGATGTCCTCCTCTGGGAACAACCGTGTTTGTTCACCCAGTACAGAAACAGTATCTTTCATGTCTTTCAAATGGGAGCAGTGAACTGTATTCTACAGAAAATAATTGTCATAATCGGCTGATGATATATAATTGCAAGGAATTGCATCTTCAGTTGGTTCCTCATAAGAATGGGTTACCATTGAAAATTAAAAACTTGCCCTCATTGAACTCGTCTTCAGTGAAATCCCATGTCCAATCTGAGAATGATAGTTTTGCATCTCCTAGAACACCTTTTTATGGATCCAAGTTGTCTAATGGTAGTGGGTTGTCTTCTCCAATATTTGAAGATTCAGCATCAAGTGTTACCAATCAGAATAGTCAATCAATGGCTTCATTTGATGTCAGGGAGGGATTAGGGGATGAAAGTAACAAAATGTTACTAGAAACATGTGCAACTTCCTGGTTATATTCTCGTTGTTTACTGCTTGGGAATCTTGTGAATGTACCAATGCTTTCAGAAGTTTGCATTTTCCAAGTGGTGGGAGCTAAGAACATGCAAGTTGACAGATCTAATCTTTATTCATCGAATGGGAGCAATAAATTGTACCCTGAAGATTCTGACATGGCAGAAAATGTAAATCAGGCTATTGTTGTTAATTGTGAAACAAAGGTATTCTTATCTCTGCCATCAAATGCAGTGTCTGAAGAGACAAATCAAAGTGAGTTTTCTAGTGTGAAACTTAAAGACAAGGTTGCTAGTCATAGCATACACGATAATATTTCTAAACTGGGTGGTCTATCTAAAGAATATACAGTCTTAAAGGATATAATTTCTTCATCGGTGGAAGATGCTTTATCAAGTTTTGGTTTACGAACTACAAGAGGTATCCTTCTTCATGGTCCATCGGGCACAGGAAAGACTTCCTTGGCTCAATTATGTGCTCATGATGTTGGGGTCAATTTTTTCCCAATAAATGGACCTGAACTTGTAACACAATATTACGGGGAAAGTGAGCAAGCATTGCATGAAGTTTTTGATTCTGCCATTCAAGCTGCACCTGCTGTGGTATTCATTGATGAATTAGATGCAATTGCCCCTGCAAGGAAAGATGGGGGTGAAGAGCTATCTCAAAGAATGGTTGCGACCTTGTTGAATTTGATGGATGGAGTTAGTAGAACTGAAGGGTTACTTGTAATTGCTGCTACCAACAGGCCTGACCATATTGAGCCGGCTCTCAGACGACCTGGAAGGTTTGACAAGGAAATTGAAATTGGTGTGCCATCACCCAAACAACGATTGGATATTTTACTCACTCTTCTTAGTGAAGTGGATCACTCTCTCTCTGAGTCACAAATTGAACACCTTGCCACAGTCACTCATGGTTTCGTCGGTGCTGATCTAGCTGCACTTTGTAATGAGGCGGCCTTGATTTGTTTACGACACTATGCTAATTTTAAGAAGAATTGTGACGTTTCTGATAACATAACAGAGCAACCTGTGCAACCTGCTATGATGAATGGTGCGACAGACTCACAAGATCATTCAGATTTTTCAACTTCATCTGATTCAGATATGTCAGTGGCCTCCAATCTTGTATCAACTTCCTGCATGATGGGAGTGTCTTCTGAAATTATGGAAGTAATACATGATAGTGGCATAGAAGAGTGTACTTTGAGAGTAAGTTTTGAAGATTTTCAGAAGGCTAGGATGAAAATAAGACCCAGTGCCATGAGAGAGGTAATACTTGAGGTTCCAAAGGTTAATTGGAAAGATGTTGGTGGCCAAAAGGAGGTCAAAGCTCAACTAATGGAAGCAGTAGAGTGGCCGCAGAAGCACCATGATGCATTCGACCGTATTGGAACTCGCCCTCCAACAGGTGTATTGATGTTTGGGCCTCCGGGTTGTAGCAAAACCCTCATGGCACGTGCAGTGGCTTCTGAAGCAGGGTTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGTAAATGGGTTGGTGAATCTGAGAAGGCTGTCAGATCATTGTTTGCAAAAGCAAGGGCAAATGCCCCATCAATTGTATTTTTTGATGAAATAGATAGTCTTGCTGTAACTCGTGGGAAGGAAAGTGACGGGGTTTCCGTGTCAGACAGGGTCATGAGTCAACTTCTAGTTGAAATGGATGGTCTGCATCAAAGAGTTAATGTCACTGTCATTGCTGCTACAAATCGGCCAGACAAGATTGACCCTGCTCTTTTAAGACCAGGACGCTTTGACCGTCTGCTATATGTTGGACCTCCAAATAAAATAGACAGAGAAGAGATATTTCACATTCATTTGCGAAAAATCCCATGTGGTCCTGATGTTAGCATTGAAGAATTGGCTAGCCTCTCAGATGGTTGTACTGGGGCTGACATATCACTAATATGTCGGGAGGCCGCTGTTGCAGCAATTGAGGAGAGCCTTGACGCTTCAGTTATAACAATGAAGCATTTAAAGATGGCAATTAAGCAGGTCCAGCCATCAGAAGTGCAGTCCTACCAAAAGCTGTCAGCGAAATTTCAAAGGGCTGTTCACTGTTGTGATACAAAAGAAGATGAGTTCAATCATGTGCAGCAAAAAAGTGGATCAACTTGGTTCAACATTTGGTAA 3111 0.4073 MSSSSKHKKHSKSHSRASSLLSTPEPNTPSENDDVQQLASFCEHASTKFPSFISKSSFFGKITDFETSHDSKGCRIWLSEPSMVSYSLSPGSIVSVSIASSGRKNVQLDSFPLKSLVNECARCYGLENGKTLDDEAGNYFALATVFPSSKVLKNGVRLSSNLSYTMGCPPLGTTVFVHPVQKQYLSCLSNGSSELYSTENNCHNRLMIYNCKELHLQLVPHKNGLPLKIKNLPSLNSSSVKSHVQSENDSFASPRTPFYGSKLSNGSGLSSPIFEDSASSVTNQNSQSMASFDVREGLGDESNKMLLETCATSWLYSRCLLLGNLVNVPMLSEVCIFQVVGAKNMQVDRSNLYSSNGSNKLYPEDSDMAENVNQAIVVNCETKVFLSLPSNAVSEETNQSEFSSVKLKDKVASHSIHDNISKLGGLSKEYTVLKDIISSSVEDALSSFGLRTTRGILLHGPSGTGKTSLAQLCAHDVGVNFFPINGPELVTQYYGESEQALHEVFDSAIQAAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVSRTEGLLVIAATNRPDHIEPALRRPGRFDKEIEIGVPSPKQRLDILLTLLSEVDHSLSESQIEHLATVTHGFVGADLAALCNEAALICLRHYANFKKNCDVSDNITEQPVQPAMMNGATDSQDHSDFSTSSDSDMSVASNLVSTSCMMGVSSEIMEVIHDSGIEECTLRVSFEDFQKARMKIRPSAMREVILEVPKVNWKDVGGQKEVKAQLMEAVEWPQKHHDAFDRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVEMDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNKIDREEIFHIHLRKIPCGPDVSIEELASLSDGCTGADISLICREAAVAAIEESLDASVITMKHLKMAIKQVQPSEVQSYQKLSAKFQRAVHCCDTKEDEFNHVQQKSGSTWFNIW* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0834 1036 ProSitePatterns AAA-protein family signature. 889 907 IPR003960 GO:0005524|GO:0016887
Lan10g0834 1036 PANTHER - 38 1017 - -
Lan10g0834 1036 CDD AAA 450 585 - -
Lan10g0834 1036 MobiDBLite consensus disorder prediction 1 15 - -
Lan10g0834 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 645 IPR027417 -
Lan10g0834 1036 CDD AAA 753 919 - -
Lan10g0834 1036 Gene3D - 748 995 IPR027417 -
Lan10g0834 1036 Gene3D - 588 747 - -
Lan10g0834 1036 Gene3D - 920 990 - -
Lan10g0834 1036 Pfam ATPase family associated with various cellular activities (AAA) 456 585 IPR003959 GO:0005524|GO:0016887
Lan10g0834 1036 Pfam ATPase family associated with various cellular activities (AAA) 787 918 IPR003959 GO:0005524|GO:0016887
Lan10g0834 1036 Pfam AAA+ lid domain 612 642 IPR041569 -
Lan10g0834 1036 Pfam AAA+ lid domain 941 986 IPR041569 -
Lan10g0834 1036 SMART AAA_5 452 588 IPR003593 -
Lan10g0834 1036 SMART AAA_5 783 921 IPR003593 -
Lan10g0834 1036 MobiDBLite consensus disorder prediction 16 34 - -
Lan10g0834 1036 Gene3D - 405 587 IPR027417 -
Lan10g0834 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 745 996 IPR027417 -
Lan10g0834 1036 PANTHER AAA-FAMILY ATPASE 38 1017 - -
Lan10g0834 1036 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0834 Lan-Chr10 12212488 12229340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0834 8 1032 Calmodulin-binding Proteins AT3G56690 54.769 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0834 - - gmx:100788600 1491.48