Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0828 ATGGAAAGGGATGCATGTTGTGGGAGTTTTTTTCAGAAGTGTAAGCCTTACATAGCTATGATTTCCTTGCAATTTGGGTATGCTGGAATGAACATAATCACAAAAGTTTCACTCAACCGTGGCATGAGTCACTATGTGCTTGTGGTTTATAGACATGCTTTTGCTACAGCAGCTATTGCTCCCTTTGCTCTTGTCCTAGAGAGGAAAGTGAGGCCAAAGATTACATTTCTTATGTTCATGCAAATGTTTGTGTTGGGTCTTCTTGGGCCTGTGATTGATCAGAACTTATACTATATGGGGTTGAAATTTACTTCCCCAACATACTCATGTGCTTTAAGCAACATGCTCCCTGCAATGACATTTGTAATGGCAGTTATATTCAGGATGGAGAAGTTGGACATGAGAAAAGTAAGATGCCAAGCAAAAGTGATTGGAACTATAGTTACAGTTGCAGGAGCCATGTTAATGACATTATACAAGGGACAAGTTATTAACTTTTTCTGGTCTCACTACATGCACCACCCCAAAAACTATGTACCTGAAAACACCACTAGCTCTGGTGAAAAAGATTGGGTTAAGGGTTCTATTCTGCTCATAATTGCTACTCTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAGTGGCATTAAGAAGATATTCTGCTCAGCTCTCACTCACAGCAATAGTGTGTTTCTTGGGAACACTACAATCAATTGGAGTTACCTTTGTCATGGAACAAAAGCCTTCTGCTTGGTCCATTGGCTGGGACATGAATCTGCTTGCTGCAGCCTATGCTGGTATTGTATCATCAGGAATTGCATATTATGTTCAAGGGATGGTCATGCAAAAAAGAGGACCAGTTTTTGTCACTGCTTTCAGCCCTTTGATGATGATAATTGTAGCCATCATGGGATCTTTCATCCTTGCAGAAAAAATATACCTTGGAGGAATTATTGGAGCTATTGTAATTGTGATGGGACTGTACTCAGTTCTGTGGGGTAAATACAAGGAGTACAAAGAGAAAGAATCAGAGATAGTGACCGAGACAATTAAGTGTTGCACAGAAGAAAATGGGAAGATGGAAACTGTGATTGAAGCTGATGAAGCAAATGATATTGAGATGCAAAAGGGTGAAGCTGGCAAAGATTCAAAGATAGAAAGTGATTATGTTCTAAAAGCTTGA 1182 0.3993 MERDACCGSFFQKCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQMFVLGLLGPVIDQNLYYMGLKFTSPTYSCALSNMLPAMTFVMAVIFRMEKLDMRKVRCQAKVIGTIVTVAGAMLMTLYKGQVINFFWSHYMHHPKNYVPENTTSSGEKDWVKGSILLIIATLAWASFFILQAVALRRYSAQLSLTAIVCFLGTLQSIGVTFVMEQKPSAWSIGWDMNLLAAAYAGIVSSGIAYYVQGMVMQKRGPVFVTAFSPLMMIIVAIMGSFILAEKIYLGGIIGAIVIVMGLYSVLWGKYKEYKEKESEIVTETIKCCTEENGKMETVIEADEANDIEMQKGEAGKDSKIESDYVLKA* 394
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0828 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Lan10g0828 393 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Lan10g0828 393 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Lan10g0828 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 335 - -
Lan10g0828 393 PANTHER WAT1-RELATED PROTEIN 10 364 IPR030184 GO:0016021|GO:0022857
Lan10g0828 393 PANTHER WAT1-RELATED PROTEIN 10 364 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan10g0828 Lan-Chr10 11895881 11899007 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0828 1 387 Nodulin-like Gene Family AT5G07050 64.194 2.46e-180 505
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0828 - - gmx:100793545 631.713