Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0826 ATGGCAGTTATGTGGAGAATATTCTTTACATTCTTATTGTTATCTTCAGTTTTCTCAATAGCCTCATCAAGAAGAGCACCTTATTCCAATAGCAACATAGATTGGTGGTGCAACCTAACCCCAGACCCAGAGCCATGCAAATATTACTTAAGTCAAATAAACCACCATGGCGAAATCAAACACAGATCCGAATTCCGGATAATACTTGTTGAGTTGGCTTTAAAGCAAGCGGTTATCATGCAAACGGAAGCGCGAGAATTCGAACAAAACATGGTGACGGAGAAGCATAAAGCTGTACATAATGATTGTGAGAAGCTCTATGAGAACACCATCTTCCATCTCAATCGTACGCTTGAAGGACTGCATGGGAAGAGAAGTTGTTCACCAGTTGATGTACAGACATGGCTCAGCACTGCTCTTACAAACATCCAAACTTGTGGAACTGGGGTAGTTGAACTCAATGTTGAAGATTTCATGGAGTCAAAATTGAGCAGCAATACTACTAAGATGATAAGGAACAGCTTAGCCATCAATATGGAATTCCTGAAACTAAATGCTGAAAAGCACAAAGTAGAAACAAAAGAAGCCTTTCCAAGTTGGTTTTCGACGCATCATAGGAAGTTGTTGCAGTCTAATTTGACGACAAAGGCACATCTTGTGGTTGCAAGAGATGGTTCAGGGCATTTTCGGAATGTCCAAGATGCCCTAAATGTAGCAGCAAGGAGAAAAATAAAGACAAGGTTTATTATACATGTGAAGAAAGGAGTTTATGCAGAGAATATTGAGGTGGAAAAGAACAATGATAACATCATGCTGGTTGGTGATGGGATGGCAAATACCATAATAACGAGTAGTAGAAGTGTTCAAGATGGCTTCACCACCTATAGCTCAGCAACAGCAGGCATAGATGGCCTCCACTTCATAGCACGTGACATAACTTTCCAAAACACAGCCGGTCCTCACAAAGGTCAAGCCGTGGCGCTCCGGTCAGCCTCTGACCTCTCCGTCTTCTACCGATGCGCCATAGCAGGTTATCAAGATACTCTCATGGTGCATGCTCAGCGTCAATTTTACAGGCAATGCTACATCTATGGCACCGTAGATTTCATCTTTGGTAATGCTGCAGTGGTGTTCCAAAATTGTAACATTTTTGCTAGAAAGCCTTTAGATGGCCAAGCAAACATGATTACGGCTCAAGGTCGAGGGGATCCATTCCAAAACTCCGGAATTTCAATCCACAATTGCCAAATAAGGGCTGCACCAGACCTCAAGCCTGTTGTTGACAAATACAACACCTTCTTGGGCAGACCTTGGCAGCAATACTCAAGAGTAGTGGTCATGAAAACTTTCATGGACACCTTGGTCAACCCATTGGGTTGGTCTCCGTGGGGTGATACTGATTTTGCTCAGGATACATTATATTATGGAGAGTATGAAAACTCAGGGCCAGGTTCGTCTACAAGCAACAGAGTAAAATGGCCTGGTTTTCATGTGATAACAAGCCCTGATGAGGCATCTAAGTTCACAGTCAATGCCCTTCTTGCAGGCGGCACATGGTTACCAACCACAAGTGTGCCCTTTAGCTCTGGCATTTGA 1596 0.4317 MAVMWRIFFTFLLLSSVFSIASSRRAPYSNSNIDWWCNLTPDPEPCKYYLSQINHHGEIKHRSEFRIILVELALKQAVIMQTEAREFEQNMVTEKHKAVHNDCEKLYENTIFHLNRTLEGLHGKRSCSPVDVQTWLSTALTNIQTCGTGVVELNVEDFMESKLSSNTTKMIRNSLAINMEFLKLNAEKHKVETKEAFPSWFSTHHRKLLQSNLTTKAHLVVARDGSGHFRNVQDALNVAARRKIKTRFIIHVKKGVYAENIEVEKNNDNIMLVGDGMANTIITSSRSVQDGFTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAIAGYQDTLMVHAQRQFYRQCYIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNSGISIHNCQIRAAPDLKPVVDKYNTFLGRPWQQYSRVVVMKTFMDTLVNPLGWSPWGDTDFAQDTLYYGEYENSGPGSSTSNRVKWPGFHVITSPDEASKFTVNALLAGGTWLPTTSVPFSSGI* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0826 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 181 IPR035513 -
Lan10g0826 531 Pfam Pectinesterase 219 516 IPR000070 GO:0030599|GO:0042545
Lan10g0826 531 PANTHER PECTINESTERASE 1 530 - -
Lan10g0826 531 SUPERFAMILY Pectin lyase-like 214 530 IPR011050 -
Lan10g0826 531 Pfam Plant invertase/pectin methylesterase inhibitor 32 177 IPR006501 GO:0004857
Lan10g0826 531 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 178 IPR006501 GO:0004857
Lan10g0826 531 SMART PMEI_2 28 177 IPR006501 GO:0004857
Lan10g0826 531 ProSitePatterns Pectinesterase signature 2. 363 372 IPR033131 -
Lan10g0826 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 178 IPR035513 -
Lan10g0826 531 Gene3D - 212 531 IPR012334 -
Lan10g0826 531 CDD PMEI-like_3 35 183 - -
Lan10g0826 531 PANTHER PECTINESTERASE 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0826 Lan-Chr10 11862833 11864755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0826 36 531 Carbohydrate Esterase AT5G51490 56.548 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0826 K01051 - gmx:100806133 803.512