Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0825 ATGTCAACAGAAATTTCCAAGAGGAGGGAAACCAACAACGGCTTATCCTTTAGTTTCAACTTGAAGCTCTTTCCTTTCATTCATTTTCTGATATCAATGGCATTATCTCAGCAGAACCACTCTCTTGAAAATGAACTCCAAACTGAAAAAATTTCATATTTCCCTCTCATTTATATTGGAAATGAAGGCCTCACAAAAAAGGTTATCAGAAAAGGTGTTACTTGGCAAACTCCATTCTTTGGAGACGAAGTTGAAGTTCATTTCAGAGGAAAAGTGGAGAATGGATCATCTCTTGAATCCAGTTATGATAAAGGATCCTCATTTCGTTTCAAATTAGGCCAATGTGAAGTTATCAAAGGTTGGGATGAAGGAGTTGCCACCATGAAGAAAGGAGAGATAGCAATCTTCAACATACCACCTAACTTAGCATATGGAGATGTTGGTTCTCCGCCATTGATTCCGCCCGATTCAACTCTCATTTTTGACATTGAATTGCTATCTTGGAGTACAATCAAAGAATTAACCAGTGATGGAGGAGTCATGAAAAAGATAATACAGGAAGGTGAAGGATGGGCTACTCCTAGAGAGAATGATGAGGTGCTAGTTAAATATGAAGCAAGGCTAGAGAATGGGGTGCTTGTTTCTAAATCAGGTCAAAGTGTGGAGTTTAATGTAAGTGATGGCTATCTTTGTCCTGCCATGAGTATAGCAGTGAAGACAATGAGAAAGGGCGAGGTAGCAGAGTTATCGATGAAATTCCTTTATGGGATCAGTCAAAATTCCAAAACAAACACTAAGCTTGATGGCTGTCTCCAACCTGATTCTAATTTGGCTACCGTCAAACTTGAGCTGGTATCATGGAAAGTCGTTACCGATGTCACAGGAAATAAGAAGATACTGAAAAAAATTATAAAAGTTGGTGAAGGGTTTGATAGGCCTAATGAAGGATCCCAAGTTAAAGTATTATATTTATGTAAACAAGATGATGGTACTATTATTGATAAGAAAGGATCAGAGAAAAAACCTTTTGAGTTCACAACTCATGAAGAACAGGTGCATGAGGGTCTAGAAAGAGCAATAATGACAATGAAGAAAGTTGAATTGGTTGATTTTGTAAAGGGGAAGCCATTTTGGAAAATGGACACTCAAGAGAAAATAGAAGCTTGTGAGAGGAAGAAGCATGATGGAAATCTTCTGTTCAAGACAGAAAATTTCAGCAGTGCATGCAAGAAATATGAACAAGCAATAAGATGCATCGAATTTGATCACTCATTCAGTGACGATGAGAAGCGTTGCGCGAATACCTTACGATTATCGTGCAATTTGAACAAAGCTGCTTGTAAACTTAAATTGGGGGAGTACTCTGAAGCTTCAAGACTATGCACAAAGGTCCTAGAAAAAGACCCTTTAAATGTTAAGGCTCTATACAGAAGATGCCAAGCATATCTTAAAACATCAGACTTAGAGAAAGCTGAAGCTGACATTAAAAGAGCTCTTATTATGGATCCAAATAATAGGGACATTAAAATTGAGTACAAGGAGCTCAAACATAAGCAGAAGCAATACAGTAGATATGAAACCAACATATTTAGCACAATGCTCTCAAGGATGGGCTAG 1617 0.3779 MSTEISKRRETNNGLSFSFNLKLFPFIHFLISMALSQQNHSLENELQTEKISYFPLIYIGNEGLTKKVIRKGVTWQTPFFGDEVEVHFRGKVENGSSLESSYDKGSSFRFKLGQCEVIKGWDEGVATMKKGEIAIFNIPPNLAYGDVGSPPLIPPDSTLIFDIELLSWSTIKELTSDGGVMKKIIQEGEGWATPRENDEVLVKYEARLENGVLVSKSGQSVEFNVSDGYLCPAMSIAVKTMRKGEVAELSMKFLYGISQNSKTNTKLDGCLQPDSNLATVKLELVSWKVVTDVTGNKKILKKIIKVGEGFDRPNEGSQVKVLYLCKQDDGTIIDKKGSEKKPFEFTTHEEQVHEGLERAIMTMKKVELVDFVKGKPFWKMDTQEKIEACERKKHDGNLLFKTENFSSACKKYEQAIRCIEFDHSFSDDEKRCANTLRLSCNLNKAACKLKLGEYSEASRLCTKVLEKDPLNVKALYRRCQAYLKTSDLEKAEADIKRALIMDPNNRDIKIEYKELKHKQKQYSRYETNIFSTMLSRMG* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0825 538 Pfam Tetratricopeptide repeat 449 505 - -
Lan10g0825 538 PANTHER PEPTIDYLPROLYL ISOMERASE 370 537 - -
Lan10g0825 538 PANTHER PEPTIDYLPROLYL ISOMERASE 33 291 - -
Lan10g0825 538 PANTHER PEPTIDYLPROLYL ISOMERASE 281 371 - -
Lan10g0825 538 SUPERFAMILY FKBP-like 53 172 - -
Lan10g0825 538 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 197 288 IPR001179 GO:0003755
Lan10g0825 538 Gene3D - 172 288 IPR046357 GO:0003755
Lan10g0825 538 SUPERFAMILY FKBP-like 175 253 - -
Lan10g0825 538 Gene3D - 289 375 IPR046357 GO:0003755
Lan10g0825 538 SMART tpr_5 472 505 IPR019734 GO:0005515
Lan10g0825 538 SMART tpr_5 389 422 IPR019734 GO:0005515
Lan10g0825 538 SMART tpr_5 438 471 IPR019734 GO:0005515
Lan10g0825 538 Gene3D - 59 171 IPR046357 GO:0003755
Lan10g0825 538 SUPERFAMILY TPR-like 379 529 IPR011990 GO:0005515
Lan10g0825 538 Gene3D Tetratricopeptide repeat domain 376 532 IPR011990 GO:0005515
Lan10g0825 538 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 370 537 - -
Lan10g0825 538 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 33 291 - -
Lan10g0825 538 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 281 371 - -
Lan10g0825 538 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 81 169 IPR001179 GO:0003755
Lan10g0825 538 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 316 367 IPR001179 GO:0003755
Lan10g0825 538 SUPERFAMILY FKBP-like 285 391 - -
Lan10g0825 538 ProSiteProfiles TPR repeat profile. 472 505 IPR019734 GO:0005515
Lan10g0825 538 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 312 365 IPR001179 GO:0003755
Lan10g0825 538 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 81 166 IPR001179 GO:0003755
Lan10g0825 538 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 193 271 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0825 Lan-Chr10 11843750 11848053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0825 59 537 Calmodulin-binding Proteins AT5G48570 49.807 5.49e-176 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0825 - - gmx:100785412 826.624