Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0820 ATGGGAAAGCCTGAAGATGAACAACAGCCTTTACCGTCCGGCGAGGATCCGCCGCAGAATGCGGTGGCTGAGTGTCGGTGTTCTTTGATTCGGAAACTCGTTGGTTTCAGATGCATTCTTGTGTTGTTATTCTCTGTTGCTGTTTTTCTCTCTGCTTTGTTTTGGTTGCCACCCTTTCTTCATCTCACAGATCAGAAGAATCTTCATGGTGATTCCATATACAATGGTCATGATATTGTTGCAAGCTTTATTGTTAATAAGTCCGTCTCTCTGCTAGAAGACAACAAGCTGCAGCTCACAAAGGAAATTTATGATGAGATAGAAGCTCCATTTACCAAAGTTGTCATCTTGTCGCTTGATTTCTTACCGAAGTTAAACAAGACAAGAGTGGTCTTTGCGGTTGATCCTGATGGTAAATACCCAGAGATGTCTTCAACTGACATTAGTTTGATAAGGGCGTCATTTCAGTCCCTTGTTATACGCCAATCATATCTCCAGCTTACAACTTCGTCCTTGTTCGGTGAGCCCTCTTTTTTTGAAGTGCTGAAATTTAAGGGAGGGATTACTATAATTCCACATCAGAGCTCGTTTCCTCTGCAGACAGTGCAAATACGATTCAATTTTACTTTGAATTTCTCCATATATCAAATACAATTAAATTTCAATGAGCTGACGAGTCAGCTTGAGTCTGGATTACATCTGGGATCCCCCGAGATCTTGCAAATCATTTTATCAAATTCTGATGGTTCAACAGTAGCTGCTCCCACTGTTGTTCAGTCAACCGTTGTACTTGCAGTTGGAGTTCCTCCATCAAAAAAGAGGATGAAGCAACTGGCGCAAACGATTATGGGACCTCATAATCTTGGCTTGAATCACACTGAATTTGGTCGAGTAAAGCAGGTCCATCTTTCGTCCATCTTGAACCACTCCCTTCATGGAAGTGATGGTAGTGGCTCTGTGCGGTCTCCTGCTCCCGCTCCTCTGCCTCATCCACCACAACACCATCACCACCACCACCATCATCATCATCACCGTCACCATGATGCCCATCTAACTCCCGCAGCTTCTCCTATACCTGCACCTTCGATTGGGGAGGGTGGAATTTCACCTGTGGTAAGTTCTCCTGCTGCTACAAAAAGTGCACCTGCACCGGGGAAAAGTCCTCAAGCTCAGGCTCCTAATTGTCAATTGGGGCATAAAAGGAGGTCTACTCATAATGCTGGGAAGCACACTCATCAAACACCTGCAGTTGCCCCTAGTATCGGTCCACATTATCTTGTTCCCGTTGCCTCACCGAAGGCAAAGGTTGTACCCCCAGCACATGCCTCTCATTCAGTACCCCATCATCTTCCTGTTTACTCACCAAAACCACAGGTTGAACCCCCTGTACATGTTTTTCATTCAGTTCCTGCTTTGAGTCCGTTACCAAATGTAGCGTTTGCTCATGCTGAGCCCCCTCCTGTGAATCCTAAGAATGCACCGGATGCAGAACGTCCGCACACACATTTTCACGGATTACCAGTAGTTACATCTTCAGCAGGTTGTCTTGGAACTGTGAAATGGGCATCTATAATCTTAGTATTACTTGTGTTGCATGTATAA 1602 0.4494 MGKPEDEQQPLPSGEDPPQNAVAECRCSLIRKLVGFRCILVLLFSVAVFLSALFWLPPFLHLTDQKNLHGDSIYNGHDIVASFIVNKSVSLLEDNKLQLTKEIYDEIEAPFTKVVILSLDFLPKLNKTRVVFAVDPDGKYPEMSSTDISLIRASFQSLVIRQSYLQLTTSSLFGEPSFFEVLKFKGGITIIPHQSSFPLQTVQIRFNFTLNFSIYQIQLNFNELTSQLESGLHLGSPEILQIILSNSDGSTVAAPTVVQSTVVLAVGVPPSKKRMKQLAQTIMGPHNLGLNHTEFGRVKQVHLSSILNHSLHGSDGSGSVRSPAPAPLPHPPQHHHHHHHHHHHRHHDAHLTPAASPIPAPSIGEGGISPVVSSPAATKSAPAPGKSPQAQAPNCQLGHKRRSTHNAGKHTHQTPAVAPSIGPHYLVPVASPKAKVVPPAHASHSVPHHLPVYSPKPQVEPPVHVFHSVPALSPLPNVAFAHAEPPPVNPKNAPDAERPHTHFHGLPVVTSSAGCLGTVKWASIILVLLVLHV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0820 533 MobiDBLite consensus disorder prediction 1 20 - -
Lan10g0820 533 MobiDBLite consensus disorder prediction 309 420 - -
Lan10g0820 533 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 532 - -
Lan10g0820 533 MobiDBLite consensus disorder prediction 384 401 - -
Lan10g0820 533 PANTHER F20B24.21 1 532 - -
Lan10g0820 533 MobiDBLite consensus disorder prediction 331 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0820 Lan-Chr10 11671087 11675844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0820 1 307 C3H Transcription Factor Family AT3G10810 51.911 1.10e-83 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0820 - - gmx:100792490 606.29