Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0814 ATGGACCAACAACAACAACACCAACCTCTTTTCACCTTCCCTGAAACCAACAACAACAACAACCCCCTCTTCCCTACAACCACCCTCCCCCGCCGCATGTTCATCTCCGGCGACACCGAAGTCGACGACGACTATGCCAATTGCGTGTACTGGAGGCCTCTCGTCGTTATTGACATGGTCTGGAATCTCGCCTTCATCATCGTCGCCGCCGGCGTGCTTCTAACCACGCTCGACGAACGACCTAATACACCACTCAGGGTTTGGCTATGTGGCTACGCCATTGATTGCGTCATCCACATGGTTTTCGTATACTTTCAATATTCTTCATTGTCTCCAACTCTGTATCGCGTTTTGAAGAAGTTAGAACCTGTAAACACTGTAGCATCGTCAGTGTGGTGGGCAATTGGATTTTATTGGATTGTTCTTGGTGACCAATATCTTTTGGAAGAATCTCCGCGTCTATACTGGTTAACAGTGATCTTTCTAGCCATTGATGTATTTGCTATTATCTTCTGCATTGGGCTGGCATGTGTACTTTTCTTTGTTCTCATCTGCTCCATCCCAGTAATAGCAGTAGCGTTTGCTATGAGAGTCAAAGAAGGTGCATCGGAAGAGGATATCATGTCACTTCCTAAGTATAGGTTTAGTCAATCAAATTCATTGGTTATGGTTGATGACCAGAAACAATCAAGCAATGGTTCATGCAATGGAAACTATACTAGTGAACTTTCTGTCCATCCAGATGATTCTGAATGCTGTATCTGCCTATCTTCGTATGTCGAAGGAGCAGAACTGCATCGCCTTCCCTGTACCCACCATTTTCATTGTGGATGCATCAGCCAGTGGCTTCGAACAAAAGCAACTTGCCCACTCTGCAAATTTAACATTCTTAGACGCGATACATTGGTTTGA 912 0.4507 MDQQQQHQPLFTFPETNNNNNPLFPTTTLPRRMFISGDTEVDDDYANCVYWRPLVVIDMVWNLAFIIVAAGVLLTTLDERPNTPLRVWLCGYAIDCVIHMVFVYFQYSSLSPTLYRVLKKLEPVNTVASSVWWAIGFYWIVLGDQYLLEESPRLYWLTVIFLAIDVFAIIFCIGLACVLFFVLICSIPVIAVAFAMRVKEGASEEDIMSLPKYRFSQSNSLVMVDDQKQSSNGSCNGNYTSELSVHPDDSECCICLSSYVEGAELHRLPCTHHFHCGCISQWLRTKATCPLCKFNILRRDTLV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0814 303 PANTHER RING-FINGER UBIQUITIN LIGASE 29 303 - -
Lan10g0814 303 CDD RING-H2_RNF111_like 251 295 - -
Lan10g0814 303 Pfam Ring finger domain 251 293 IPR001841 -
Lan10g0814 303 PANTHER TARGET OF ERK KINASE MPK-1 29 303 - -
Lan10g0814 303 ProSiteProfiles Zinc finger RING-type profile. 252 293 IPR001841 -
Lan10g0814 303 SUPERFAMILY RING/U-box 245 298 - -
Lan10g0814 303 SMART ring_2 252 292 IPR001841 -
Lan10g0814 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 298 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0814 Lan-Chr10 11492049 11495560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0814 40 298 C3H Transcription Factor Family AT1G68070 43.103 3.53e-82 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0814 - - gmx:100806994 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0814 10 11492049 11495560 Lan6g1605 6 23923546 23926522 LSH