Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0813 ATGGACTTTGGTCATCAAGATTCTGTTCCTGCACCTGGGTCCTTTGATAAGTCTAGGGTTTTGAATGTTAAGCCAATTAGAACCCTTGTTCCTGTGTTCCCTTCATCCAATCCGTCGTCATCCGCAAATCCACAAGGTGGTGCTCCTTTTGTTTGTGTTTCTCCTTCTGGTCCTTACCCATCTGGTGTTGCACCCCTTTACCCGTTCTTTGTCTCCCCTGAATCCCAGAGGCTCTCTGAACAAAATGCACAACCACAAGTTGGTCAACGTGTGCCTACAGGCCCGATATCTACTGCTGTTCCAATTAATTCATTTAGGACACCAACCGGGGCCACAAATGGAGATTTCGGATCGTCGCAAAGGAAGAACAAAGGTGGTGAGGAAGATGATTATGCTGATATGAATGAATTTGATGTCGAAGATGGAGCTGGGGATGGGGGTCGTAAACGCAAGTCGGGGAAGAAGGGAAGAAAGCCTAAGGGTGCTGTTGGAACACCGTCTAATGTTAATCCAGAAGCAGTGGCTAATGATATTTTCAAATCAATTAACCCCCTAGTTTTCGATGTACTTAGTCAGCCTGAAGGTTCCAGGGACTCGGTTGTGTATACACTTCTGGTATATGAAGTGCTAAGAAGAAAGCTCGGACAAGCAGAAGAGACAGCAAAGGATATTGCTGGGGCAAAACGACCTGATTTGAAGGCAGGTGCACTGATGTTGACTAAAGGGATTCGGGCAAATAGCAAGAAAAATATTGGACCTGTGCGGGGTGTTGAAATTGGGGATATTTTCTATTTTAGAATTGAATTGTGCTTAGTGGGATTACATGCTCCTTCTATGGCTGGAATTGATTACATCGGTACCAAAATCAGTCAGGAGGAAGAGCCTTTAGCTGTCAGTATTGTCTCATCCGGAGGATATGAAGATAATGTCGAGGATGGGGATGTGCTGATTTACACTGGCCAAGGTGGGGCTAGCAAAGAGAAGGGAGCGAGTGATCAAAAGCTTGAAAGAGGCAATCTTGCATTGGAAAAGAGCATGCACAGAGGTAATGATGTGAGAGTGATTAGGGGTTTGACGGATTTAGCACATCCAACTGGGAAGGTGTATGTCTATGACGGTCTTTACAAGATCCAGAACACTTGGGTGGAGAAAGCAAAAAATGGTTTCAACGTGTTCAAGTATAAATTAGTCAGGTGTCCTGGGCAGCCTGCAGCATATATGATTTGGAAATCCATTCAACAATGGACTGAGAAAAATGTTCCGAGGACGGGGGTAATATTGCCTGATCTTACTTCATCGGCAGAAAAATTACCTGTCTGTCTTGTGAATGATGTTGATAATGAGAAGGGCCCTGCATATTTCACTTACTCCCCTACTCTCAAGAACTTGAAGCCAATAGCTCCTATAGAATCTTCTGCTGGATGTTCTTGTGTTGGTGGGTGCCAACCTGGCAGTTATAACTGTCCTTGCATGCAAATTAATGGAGGTTTTCTTCCATATTCTGCAATGGGGATACTTTGGGACCTAAAATCCGTTGTGTATGAGTGTGGTTCTTCCTGTCAGTGCCCTCCTACTTGCCGAAGTCGGGTTTCTCAAGGTGGCTTGAAAATTCGTTTGGAGGTGTTCAGAACCAAGGATAAGGGTTGGGGTCTAAGATCATGGGATTCTATTCGTGCCGGAACTTTCATATGTGAGTACGCTGGAGAAGTCATAGATAATGCTAGAGTAGAGGAGCTTGTTGGTGAAAATGAAGATGATTATATTTTTGATTCTACTCGCATTTATCAGCAACTGGACGTTTTTCCTAGCGATACTGAAGCTCCAAAAATACCATATCCACTTTATATAACAGCAAAAAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCGAATGTGTTATGGCGTCCAGTTGTACGTGGAAATAAGAATGAATCTGATCTTCATGTTGCTTTCTATGCAATTAGACATATCCCTCCATTGGTGGAGTTAACTTACGATTACGGGATAGTTCTTTCTCTCAAACCAGGACAGAAGAAAAAGAAATGCTTGTGTGGATCTGTGAAATGCCGGGGTTACTTTTGTTAA 2097 0.4359 MDFGHQDSVPAPGSFDKSRVLNVKPIRTLVPVFPSSNPSSSANPQGGAPFVCVSPSGPYPSGVAPLYPFFVSPESQRLSEQNAQPQVGQRVPTGPISTAVPINSFRTPTGATNGDFGSSQRKNKGGEEDDYADMNEFDVEDGAGDGGRKRKSGKKGRKPKGAVGTPSNVNPEAVANDIFKSINPLVFDVLSQPEGSRDSVVYTLLVYEVLRRKLGQAEETAKDIAGAKRPDLKAGALMLTKGIRANSKKNIGPVRGVEIGDIFYFRIELCLVGLHAPSMAGIDYIGTKISQEEEPLAVSIVSSGGYEDNVEDGDVLIYTGQGGASKEKGASDQKLERGNLALEKSMHRGNDVRVIRGLTDLAHPTGKVYVYDGLYKIQNTWVEKAKNGFNVFKYKLVRCPGQPAAYMIWKSIQQWTEKNVPRTGVILPDLTSSAEKLPVCLVNDVDNEKGPAYFTYSPTLKNLKPIAPIESSAGCSCVGGCQPGSYNCPCMQINGGFLPYSAMGILWDLKSVVYECGSSCQCPPTCRSRVSQGGLKIRLEVFRTKDKGWGLRSWDSIRAGTFICEYAGEVIDNARVEELVGENEDDYIFDSTRIYQQLDVFPSDTEAPKIPYPLYITAKNEGNVARFMNHSCSPNVLWRPVVRGNKNESDLHVAFYAIRHIPPLVELTYDYGIVLSLKPGQKKKKCLCGSVKCRGYFC* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0813 698 MobiDBLite consensus disorder prediction 75 120 - -
Lan10g0813 698 SUPERFAMILY SET domain 437 695 IPR046341 -
Lan10g0813 698 Gene3D SET domain 420 697 IPR046341 -
Lan10g0813 698 ProSiteProfiles Pre-SET domain profile. 473 534 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan10g0813 698 MobiDBLite consensus disorder prediction 75 170 - -
Lan10g0813 698 Pfam Pre-SET motif 432 529 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan10g0813 698 ProSiteProfiles YDG domain profile. 252 398 IPR003105 -
Lan10g0813 698 SUPERFAMILY PUA domain-like 235 419 IPR015947 -
Lan10g0813 698 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 11 697 - -
Lan10g0813 698 Gene3D - 235 419 IPR036987 -
Lan10g0813 698 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 11 697 - -
Lan10g0813 698 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 114 697 IPR025794 GO:0016571
Lan10g0813 698 ProSiteProfiles SET domain profile. 537 672 IPR001214 GO:0005515
Lan10g0813 698 Pfam SET domain 548 672 IPR001214 GO:0005515
Lan10g0813 698 SMART preset_2 427 521 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan10g0813 698 SMART set_7 537 678 IPR001214 GO:0005515
Lan10g0813 698 ProSiteProfiles Post-SET domain profile. 682 698 IPR003616 -
Lan10g0813 698 SMART G9a_1 247 402 IPR003105 -
Lan10g0813 698 Pfam SAD/SRA domain 251 402 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0813 Lan-Chr10 11451378 11455417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0813 7 697 Su(var)3-9 homologs AT1G73100 46.976 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan10g0813 SAD_SRA 3e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0813 K24405 - gmx:100786650 1086.25