Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0799 ATGTATCACGCAAAAAAAAATTCAACGTCAGCCGTGGTGCCACATGAATCTCAATGCAGTTCTGAACTTGCAAATGTTGCGACTTTGGGTGGATCTGCCGTGAAAAGTGGCGCACCTGCTGGGGGAAGTGGGAAACAACGCTTACGATGGACATCCGATCTTCATGACCATTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGAGCAACACCAAAAGGTGTTTTGAGAGTGATGGGTGTACCTGGACTTACTATTTATCACGTCAAAAGCCATTTACAGAAGTATCGCCTTGCGAAGTACTTGCCTGAATCTTCAGCTGATAGTAAAGACTCTAAAGATGAGAAAAGGAATTCTGGAGACAGCATTTCCGGCGCAGATTCTTCCCCGGGATTTCAAATCAATGACGCTCTAAGAATGCAGATGGAGGTTCAGAAACGTCTTCATGAACAGCTTGAGGTTCAACAGCAGTTGCAAATGAGAATAGAAGCACAAGGTAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAGTTAGGTAGTACCTTGACAACCACGGAAACACCACCATTGTCCCACGATGCTCAAAATAATACTCGGTCAAAGCCTTCTAGGTATAGCGATGCCCTTGCAAGTACTTTATCTCAGCTGAAAAAACAGAAAACCGATGATGATTCAAAGGATGGCTTCACTGCTTCACAGGTGCCTACAAATAGTACACAGAAGACTGATTGTAGTGCTGGTAAGATGGATCCAAACTTGCATGAAGGTGATGATGGGTTCGGATTTGATTTGGAGACTGAAAACGGTGAAAATAAGGAGAGTGAGGAGTAA 837 0.4373 MYHAKKNSTSAVVPHESQCSSELANVATLGGSAVKSGAPAGGSGKQRLRWTSDLHDHFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADSKDSKDEKRNSGDSISGADSSPGFQINDALRMQMEVQKRLHEQLEVQQQLQMRIEAQGKYLQKIIEEQQKLGSTLTTTETPPLSHDAQNNTRSKPSRYSDALASTLSQLKKQKTDDDSKDGFTASQVPTNSTQKTDCSAGKMDPNLHEGDDGFGFDLETENGENKESEE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0799 278 Gene3D - 44 103 - -
Lan10g0799 278 MobiDBLite consensus disorder prediction 182 218 - -
Lan10g0799 278 MobiDBLite consensus disorder prediction 105 122 - -
Lan10g0799 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 268 IPR044848 GO:0003700
Lan10g0799 278 MobiDBLite consensus disorder prediction 250 278 - -
Lan10g0799 278 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Lan10g0799 278 Pfam Myb-like DNA-binding domain 48 98 IPR001005 -
Lan10g0799 278 Pfam MYB-CC type transfactor, LHEQLE motif 134 179 IPR025756 -
Lan10g0799 278 PANTHER OS05G0491500 PROTEIN 3 268 - -
Lan10g0799 278 MobiDBLite consensus disorder prediction 230 248 - -
Lan10g0799 278 SUPERFAMILY Homeodomain-like 44 99 IPR009057 -
Lan10g0799 278 Coils Coil 136 156 - -
Lan10g0799 278 MobiDBLite consensus disorder prediction 105 133 - -
Lan10g0799 278 MobiDBLite consensus disorder prediction 182 278 - -
Lan10g0799 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0799 Lan-Chr10 10999775 11003526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0799 34 226 G2-like Transcription Factor Family AT3G13040 47.059 6.68e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan10g0799 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0799 - - gmx:100783132 369.777