Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0791 ATGGGTTGGGCTAAGTTGCTTGTATCAGATTTTGTTATATCTTTCATGTGGGTATGGTCTGGGGTGTTGGTTAAGGAACTTGTATGCAAAAATATGGGGTTATGTAATGAACCCATTGGTGAAATTTTGAAGCTTGGACTCAACATCATAACCATGTTCATCTTTGCATTCTTGGGCAAAATTACCCATGGTGGTGCCTCTAATCCTATCAACATTTTGGCTGGTGCAGTTTCTCAGAATTTTGACCATTTCCTATATTGCATGGGTGCTAGAATTCCTTCCCAGGTGCTTGGATCTATTGTTGGAGTGAAACTTATTATTGATACCATTCCTGAAGTAGGAAGGGGACCGCGTTTGAATATTGACATTCATCAGGGTGCATTGACAGAAGGATTACTAACATTTGCAATTGTAATTATTTCGCTTGGGCTTACCGCAAAAATTAGTGGAAGTTTCTTCATGAAGACTTGGATCTCCAGCCTCTCCAAGTTAACACTTCACATACTTGGCTCTGACCTGACTGGTGGCTGTATGAACCCCGCATCTGTAATGGGATGGGCTTATGCAAGAGGGGATCACATAACAAAGGAGCACATCCTTGTATACTGGCTTGCCCCTATAGAGGCAACCATATTGGCAGTGTGGACATTCAAATGGTTAGTGAAGCCTGCAAAAGAAGATAAAACAGACTCGAAAAGTAAATCGGATTGA 711 0.4149 MGWAKLLVSDFVISFMWVWSGVLVKELVCKNMGLCNEPIGEILKLGLNIITMFIFAFLGKITHGGASNPINILAGAVSQNFDHFLYCMGARIPSQVLGSIVGVKLIIDTIPEVGRGPRLNIDIHQGALTEGLLTFAIVIISLGLTAKISGSFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIEATILAVWTFKWLVKPAKEDKTDSKSKSD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0791 236 PANTHER AQUAPORIN SIP2-1-RELATED 4 236 IPR044226 GO:0015267
Lan10g0791 236 SUPERFAMILY Aquaporin-like 4 228 IPR023271 -
Lan10g0791 236 Gene3D Glycerol uptake facilitator protein. 1 236 IPR023271 -
Lan10g0791 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0791 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0791 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0791 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0791 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0791 236 PANTHER AQUAPORIN SIP2-1-RELATED 4 236 - -
Lan10g0791 236 Pfam Major intrinsic protein 7 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0791 Lan-Chr10 10866427 10877627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0791 1 236 Major Intrinsic Protein MIP AT3G56950 60.338 7.88e-103 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0791 K09875 - gmx:100786138 357.836