Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0771 ATGGAAGATCAGGGCCAGCATGACCCAACCACAAATGGCTCCGAAAAAAGTGAACCGGTGAGGTCAAGGTGGACTCCAAAACCAGAACAAATCCACATACTTGAGTCCATTTTCAACAGTGGCATGGTTAATCCTCCCAAAGATGAAACCATCAGAATAAGGAAACTCCTTGAGAAATTCGGCACCGTTGGTGATGCCAACGTCTTCTACTGGTTTCAGAACCGCCGCTCAAGATCTCGCCGCCGCCAGCGGCAGCTGCAAGCAAGCCTTGAGCATAGAAATAATCAAATGATGCAGCCCTCTCAAGTTGATGTTGGTGCAATTCCATATCATAAGGATGTAACCAGCCCTTCTCTATCGGCAACCGCAACCACAACCGCAATTGTTTCCGCATCGTCTATCCGTGATTCCTCTTCATCATGTGGTGAAGGTGGTGTTTTTGGTGGCCAAGAAAGCATAGATAGTTTCTTTTCAATCTCTTCTCAAATGAGTTTCCCAGAAATTGATTACAGTTCAGCTGCAACATCAGTTTTTTACCCTCCTGTTGTTCAAAATTTTAGCTACCAATCTGGATCCATCACAGTGTTTATCAATGGGATTGCAACAGAAGTTCCATGTGGACCAATAGACATGAAGACAGTGTTTGGTGAAGATGTTATATTAGTTCATTCATCTGGATTGCCACTCCCCACAAATGAGTTTGGCTTCTTGATGCAGAGCTTGCAACTCGGTGAAAGCTACTTTCTGGTTTCAAAGCCAACACCAAGTATGAACTAA 777 0.4427 MEDQGQHDPTTNGSEKSEPVRSRWTPKPEQIHILESIFNSGMVNPPKDETIRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQLQASLEHRNNQMMQPSQVDVGAIPYHKDVTSPSLSATATTTAIVSASSIRDSSSSCGEGGVFGGQESIDSFFSISSQMSFPEIDYSSAATSVFYPPVVQNFSYQSGSITVFINGIATEVPCGPIDMKTVFGEDVILVHSSGLPLPTNEFGFLMQSLQLGESYFLVSKPTPSMN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0771 258 SMART HOX_1 19 86 IPR001356 GO:0003677
Lan10g0771 258 MobiDBLite consensus disorder prediction 1 26 - -
Lan10g0771 258 Gene3D - 21 88 - -
Lan10g0771 258 SUPERFAMILY Homeodomain-like 12 88 IPR009057 -
Lan10g0771 258 ProSiteProfiles 'Homeobox' domain profile. 17 82 IPR001356 GO:0003677
Lan10g0771 258 Pfam Homeodomain 21 81 IPR001356 GO:0003677
Lan10g0771 258 PANTHER WUSCHEL-RELATED HOMEOBOX 11 5 253 IPR044558 GO:0003700|GO:0048830
Lan10g0771 258 PANTHER WUSCHEL-RELATED HOMEOBOX 11 5 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0771 Lan-Chr10 10446478 10448636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0771 2 250 Wox Gene Family AT3G03660 51.685 3.56e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan10g0771 Homeodomain 4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0771 - - lang:109335690 297.745