Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0764 ATGCTCCCAAGCTTAAATTTTTTAGAAAATTTTAATCTTTCTCAAGAACTTTGTGAGATTATAACCGATATTCTCTTACTCATTCAGCTTTTGGTTCTTCATATCATGACAATGTCAAAGAGAAACCATTCTTCATTGCTTCTATTTTTTGTTACTATTTTACTATATATCCATCATTCAGAGGAACTTCAATCTTCACAATCTCAGAATCTTCTAAGAATTCAAAGGCTATTGAACTTTCCTTCTGCTCTAAGCAACTGGAATAAGAACACAGACTTTTGCGGCATAGATTCAAGCTTTTCTGTCACTATAGTATGCTATGAAGGGAACATAACCCAACTGAACATAATAGGTGAAAGAAGAACTCCACTTCGAAATTTCTCTATAAATTCCTTCGTCGCAACAATGGTAAGGCTTCAAAGTTTGAAAGTCCTTACACTTGTTTCTCTTGGTATATGGGGTCCATTGCCTGGTAAGATTGCCAATCTGTCATCACTGGAAATTGTTAATATGAGTTCGAATTTTATACATGGTTCCATCCCTTACGAGATTTCGACGCTTTCAAATCTCCAAACACTCATTCTTGACAACAATATGTTTTCCGGCCAGCTTCCTAATTGGTTTGGTTTAATTCCAGCCTTAAATGTGTTAAGTTTTAAAAATAATTTGTTCAATGGATCTCTACCGAATTCGGTCGGTAGGTTGGTGAATTTGAGAATTCTTTCACTTTCACATAACCAGTTCAATGGGACAGTACCTGATTTGAGTAGTTTGAAAAATCTGCAAGTGCTGGAACTGGATGATAATGCTTTTGGACCTCAGTTTCCTGGGCTTGGTAACAAGTTGGTTGCTCTAGTGCTAAGAAACAATAGGTTCAGATCCAGTATCCCTGCTGAAGCGAGCTCATACGATATGCTTCAGAAATTGGATATCTCATCGAATACATTTGTGGGGCCATTCCCACCAGCATTGTTATCACTTCCTTCTATTACTTATCTGAACATTTCTGGGAATAAATTAACCGGGTTGCTTTTTGAGAACCTATCTTGCAATTCCGAACTCGATGTAGTTGATTTATCTTCAAATCTTTTGACTGGGAGCTTACCTAGATGTTTAGTGTCAAACCCCGGGACTGTTTTATATGCTAGAAATTGTCTTGAGAAACCAAATCAAGATCAGCAGCCACAGCCCTTTTGCCACACTGAAGCCGTAGCTGTGGGAATATTGCCTGACAGAAAGAATCATACACAAGTGTCGAACGTATTTCTTTCAATCGGCATAATAGGTGGGACTATTGGAGGTGTTGCACTTTTTTTGCTGATTTTCTTTCTTATTAGAAGAGGAAATGCCAAAAGCAAAATAAAGAACCCTCAAACAAGATTGATTTCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCAAGGTACATATCTCAAACAAAGAAGTTCGGAGCCGTTGGGCTGCCAACGTACCGAAGTTTCTCATTGGAAGAGATTGATGCAGCTACAAACAACTTTGACAACTCTTCTTTCATAGGTGAAGATTCTTATGGCCAGATGTACAGAGGTCAGCTGAAGAATGGTTTGCTTGTTGCTATTAGATGTGTAGAAATGAAAAAGAGCTACAGCACTCAAAACTATATGCACCACATAGAGCTGATATCAAAACTTAGGCATCATCATTTAGTCAGCGCTCTTGGACACTGCTTCGAATGTTCTTTAGATGATTCAAGTGTCAGAAGAATATTTCTTGTCTTCGAATACATACCAAATGGAACACTCAAGAGCTGGATCTCTGGAGGGGATGCCAGAAAGTCGCTGAGTTGGACCCAACGCATAGGAGCTGCAATTGGAGTAGCAAAGGGAATCCAATTTTTGCATACAGGGATTGTTCCTGGTGTATATTCCATTAATCTCAAGATAGAAGATGTCGTATTGGATCAGAACCTTGTTGCAAAAATCGGCAGCTATAACCTTCCTTTGTTATCTAACATGGGAAAGGTTCGGAATGGAAGCTCTTCCAGTGGATTCAAAAATTCTAGCATTAATAAAAGTGTGAAACATGAAGATAAGTCTGATATACATGACTTCGGAGTAATGCTTCAGGAACTCATTCTAGGAAAGACAATAAAGTCAAGGAAAGATGTTGATGCCTTTAAGGATCTGTTGCAAGCAAGCATAGCAGCTGATGATGAAGCTCGGAGGAGCATTGTTGATCAAGCAATTCGTAAGGCGTGTTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTGAGATGTTTGGTTAAAGAGCCTGCAGATAGGCCTTCTATAGAAGATGTCTTGTGGAATTTGCTGTTTGCTGCTCAAGTACAAGATGCTTGGAGAGGGGATTCTCAAAGTAGTGATGGGTCACCTGGCTCACCTTTACAGCCTCCAACATTGACCTTTGATTAG 2451 0.3905 MLPSLNFLENFNLSQELCEIITDILLLIQLLVLHIMTMSKRNHSSLLLFFVTILLYIHHSEELQSSQSQNLLRIQRLLNFPSALSNWNKNTDFCGIDSSFSVTIVCYEGNITQLNIIGERRTPLRNFSINSFVATMVRLQSLKVLTLVSLGIWGPLPGKIANLSSLEIVNMSSNFIHGSIPYEISTLSNLQTLILDNNMFSGQLPNWFGLIPALNVLSFKNNLFNGSLPNSVGRLVNLRILSLSHNQFNGTVPDLSSLKNLQVLELDDNAFGPQFPGLGNKLVALVLRNNRFRSSIPAEASSYDMLQKLDISSNTFVGPFPPALLSLPSITYLNISGNKLTGLLFENLSCNSELDVVDLSSNLLTGSLPRCLVSNPGTVLYARNCLEKPNQDQQPQPFCHTEAVAVGILPDRKNHTQVSNVFLSIGIIGGTIGGVALFLLIFFLIRRGNAKSKIKNPQTRLISENAASGYTSKLLSDARYISQTKKFGAVGLPTYRSFSLEEIDAATNNFDNSSFIGEDSYGQMYRGQLKNGLLVAIRCVEMKKSYSTQNYMHHIELISKLRHHHLVSALGHCFECSLDDSSVRRIFLVFEYIPNGTLKSWISGGDARKSLSWTQRIGAAIGVAKGIQFLHTGIVPGVYSINLKIEDVVLDQNLVAKIGSYNLPLLSNMGKVRNGSSSSGFKNSSINKSVKHEDKSDIHDFGVMLQELILGKTIKSRKDVDAFKDLLQASIAADDEARRSIVDQAIRKACLDQSLKTMMEICVRCLVKEPADRPSIEDVLWNLLFAAQVQDAWRGDSQSSDGSPGSPLQPPTLTFD* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0764 816 SUPERFAMILY Protein kinase-like (PK-like) 492 785 IPR011009 -
Lan10g0764 816 ProSiteProfiles Protein kinase domain profile. 510 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0764 816 Pfam Protein tyrosine and serine/threonine kinase 515 780 IPR001245 GO:0004672|GO:0006468
Lan10g0764 816 MobiDBLite consensus disorder prediction 795 816 - -
Lan10g0764 816 SUPERFAMILY L domain-like 136 376 - -
Lan10g0764 816 Gene3D Ribonuclease Inhibitor 280 386 IPR032675 -
Lan10g0764 816 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 46 804 - -
Lan10g0764 816 ProSiteProfiles Leucine-rich repeat profile. 237 259 IPR001611 GO:0005515
Lan10g0764 816 Gene3D Phosphorylase Kinase; domain 1 481 592 - -
Lan10g0764 816 Gene3D Transferase(Phosphotransferase) domain 1 594 791 - -
Lan10g0764 816 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 46 804 - -
Lan10g0764 816 Gene3D Ribonuclease Inhibitor 64 279 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0764 Lan-Chr10 10270503 10276315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0764 80 812 Miscellaneous Gene Families AT3G03770 60.537 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lan10g0764 PK_Tyr_Ser-Thr 7.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0764 - - lang:109358707 1545.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0764 10 10270503 10276315 Lan5g0202 5 2427084 2432265 LSH
Lan10g0764 10 10270503 10276315 Lan3g0619 3 7617147 7627870 LSH