Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0741 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGTGATCTTCAGCCTGGTCCACTACCCGTTGATCAAGGAGAGAATTGGGTGCAACCTCCTGCCCAGAACAGAACTAGGAGGAGAGGTGGAAGTGGAAGAGGAAGAGGGAGAGGTGGTAATGCGACAGCTGTAGGCAAAGGGCCTTCACCAGTTGTACCCCCAAGGCGAACTGCAGCTGGTAGAGGCCGTGGAGCAAGAGTGGTTGATCTCGATCCCGAACCTTGTGACGTCCTTCCAGAACCTGTTGCTTTAGGGGCTCCGGAACCTGTTAACAATAACGTAGAGGTAGTAGCCAATAATAATATTGTGATGGAGGGTGGGAGTGGAGACAAGGCGGTGGCAGCTGAAGAGGAAGCAAGCACAACACCTGTCCCTGATAGGGTGCAAGTTGGTGGCTCACCTGTATATAAGATTGAAAGGAAATTGGGCAAGGGTGGCTTCGGCCAAGTTTATGTTGGCAGAAGGATTAGCGGGGGCTCTGATCGAACAGGCCCTGATGCAATCGAGGTTGCACTCAAGCTTGAGCACAGAAACAGTAAAGGATGCAATTATGGCCCTCCTTATGAGTGGCAAGTGTACAATACTCTGAATGGCTGCTATGGAATTCCCGGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTCTGGTCATGGACATCCTTGGGCCCAGTCTCTGGGATGTATGGAATTCTCTTGGCCAATCGATGTCTCCAAATATGGTTGCTTGCATTGCAGTGGAGGCAATATCAATCCTTGAGAAGCTCCATTTGAAAGGGTTTGTGCATGGAGATGTCAAACCAGAAAACTTTTTGCTTGGTCAACCTGGAACAGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTGGCTTCCAGATGGAAGGATGCGTCATCTGGTCAACATGTTGACTATGATCAGAGACCTGATATATTCAGAGGAACAATAAGGTATGCCAGTGTACATGCACATTTAGGTAGGACTGGAAGTCGAAGGGATGATCTTGAGTCACTGGCGTACACTTTAATATTTCTAATAAAAGGGAGATTACCCTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAGAAGATGGGCACTTCAGCAGAGTTGATGTGCTGCTTTTGTCCTGCCCCATTTAAGCAGTTCCTTGAAGCTGTTACCAACATGAGATTTGATGAGGAGCCAAATTATTCAAAGCTTATTTCACTTTTTGATAGCTTGATTGAACCATGCACTCCATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGTCAAAAGCGGGGAAGGATGCTTATTAACCTGGAAGAAGATGAACAGCCTAAGAAGAAAGTCCGATTAGGGAGTCCTGCTATGCAGTGGATATCAGTGTATAATGCACGTCGTCCCATGAAGCAGAGATATCACTATAATGTAGCTGATACTAGGTTGCGACAGCATGTAGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTGGCCTCTTCAGGAAATCTGTGGGCTCTAATCATGGATGCAGGAACAGGTTTTTCTTCCCAGGTTTATGAGTTGTCAGCAGCTTTCCTGCATAAGGATTGGATTATGGAGCAATGGGAGAAAAATTTCTATATCAGTTCAATAGCTGGTGCAGTTAATGGGAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTACACACAGCAATCATACAAAGTCAGTGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACAACTGCTGGCAATCGATGGGGTGTTGTTATGTCCAGGAATGCTGGGTATTCGGATCAGGTTGTGGAGCTAGACTTTTTGTATCCAAGTGAAGGAATCCATCGACGATGGGAGAGTGGTTACCGGATTACATCTATGGCTGCTACTAGTGATCAGGCAGCCTTCATACTGAGCATCCCAAAACGTAAATTACTTGATGAAACTCAAGAGACTTTGCGCACATCTGCCTTCCCTAGCACTCATGTAAAGGAAAAATGGTCTAAGAATCTATATATTGCCTCAATATGTTATGGTCGAACCGTTTGCTAG 2136 0.4518 MPELRSGARRSKRLGDLQPGPLPVDQGENWVQPPAQNRTRRRGGSGRGRGRGGNATAVGKGPSPVVPPRRTAAGRGRGARVVDLDPEPCDVLPEPVALGAPEPVNNNVEVVANNNIVMEGGSGDKAVAAEEEASTTPVPDRVQVGGSPVYKIERKLGKGGFGQVYVGRRISGGSDRTGPDAIEVALKLEHRNSKGCNYGPPYEWQVYNTLNGCYGIPGVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPNMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASRWKDASSGQHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMGTSAELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPAMQWISVYNARRPMKQRYHYNVADTRLRQHVDKGIEDGLYISCVASSGNLWALIMDAGTGFSSQVYELSAAFLHKDWIMEQWEKNFYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGNRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATSDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0741 711 ProSitePatterns Protein kinases ATP-binding region signature. 156 187 IPR017441 GO:0005524
Lan10g0741 711 SMART serkin_6 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0741 711 PANTHER CASEIN KINASE-RELATED 106 685 - -
Lan10g0741 711 MobiDBLite consensus disorder prediction 1 87 - -
Lan10g0741 711 ProSiteProfiles Protein kinase domain profile. 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0741 711 PANTHER BNAA05G37270D PROTEIN 106 685 - -
Lan10g0741 711 CDD STKc_CK1 150 424 - -
Lan10g0741 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Lan10g0741 711 Pfam Protein kinase domain 150 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0741 711 Gene3D Transferase(Phosphotransferase) domain 1 117 466 - -
Lan10g0741 711 SUPERFAMILY Protein kinase-like (PK-like) 150 437 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0741 Lan-Chr10 9366232 9372388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0741 267 424 MAP Kinase Kinase Kinase AT5G50180 25.000 6.30e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lan10g0741 Pkinase 1.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0741 - - gmx:100801967 1345.49