Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0735 ATGGATGTGTGCCAAAATGTATCAGTTTCAAGTGAGTGCAAGCAAGAGCAGATTCATCCCCCTTGCTCAACAAGCCTTGATGACCTATTCTCTGCTCAGAACATGGAAGTGGATGTTGGGTTGGAGTGGCTATCAGTATTTGTTGAAGACTGCTTCTCAAGCCCCCCAATCTGTTTATTGGGACCTTCTGGTGTTCAAACAACAAGCACAAGCTCAAACCCTTCAAGCACAATGAAGAGACCCCATCATCAGAATGAGTCATTTTCACTTCAGAATCTTGCAGTTCATGGAAAACCCAGAAGCAAAAGAAAAAGGCTTTCAGCCCCTATAACCAATGACCCTTTAAGAACTAGCATATGGTCACATAAAATAACAAGTCCACAAAATGAAACACCCTTTTGTTCAGACCCTCCACTCCTCAAACAGGCTTATTGGTTGGCTGATAGTGAACTCTTTGTCCCTAAACAGAAGAATGATGATGAAGAAGTTATGATGGAGAAAGGGATAGTGTTGAGTAAGGAAAGTTTTGGTGACTCTGAGCAGGATGCTGATGATGTTTTTAGCAAAAATTTTCAGCAGCATCCAATGCCAAGAAGGTGCACTCATTGTCTTTCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTAGGTCCAAAGACACTATGCAATGCATGTGGTGTGAGGTACAAGTCTGGTAGGTTGCTTCCAGAGTATAGGCCAGCAAAAAGTCCTACTTTTGTAAACTACTTGCACTCAAATTCCCACAAGAAAGTTATGGAGATGAGGGGAAATGGATGCTCTATCTTCCATTCCCAATGA 819 0.4298 MDVCQNVSVSSECKQEQIHPPCSTSLDDLFSAQNMEVDVGLEWLSVFVEDCFSSPPICLLGPSGVQTTSTSSNPSSTMKRPHHQNESFSLQNLAVHGKPRSKRKRLSAPITNDPLRTSIWSHKITSPQNETPFCSDPPLLKQAYWLADSELFVPKQKNDDEEVMMEKGIVLSKESFGDSEQDADDVFSKNFQQHPMPRRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVNYLHSNSHKKVMEMRGNGCSIFHSQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0735 272 MobiDBLite consensus disorder prediction 64 85 - -
Lan10g0735 272 Gene3D - 190 260 IPR013088 GO:0006355|GO:0008270
Lan10g0735 272 PANTHER GATA TRANSCRIPTION FACTOR 1 269 - -
Lan10g0735 272 Pfam GATA zinc finger 200 234 IPR000679 GO:0006355|GO:0043565
Lan10g0735 272 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 269 - -
Lan10g0735 272 ProSiteProfiles GATA-type zinc finger domain profile. 194 230 IPR000679 GO:0006355|GO:0043565
Lan10g0735 272 CDD ZnF_GATA 199 246 IPR000679 GO:0006355|GO:0043565
Lan10g0735 272 SMART GATA_3 194 248 IPR000679 GO:0006355|GO:0043565
Lan10g0735 272 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 195 258 - -
Lan10g0735 272 ProSitePatterns GATA-type zinc finger domain. 200 225 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0735 Lan-Chr10 9197640 9199221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0735 41 262 C2C2-Gata Transcription Factor Family AT4G32890 40.088 2.33e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan10g0735 GATA 1.8e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0735 - - gmx:100786479 357.836