Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0729 ATGACCTTCATAAGGGAAGATGAAGAAGTAGATGATGAAAAATCAACTAATAAACAAGATATAGATGGTGGGTCACACTCATCACAGACTTATGAAGATGGTAACTTAGGAGAATTGTTAAGTTTGGGCCTCCAAGGAGACATGCATAATGAATCAGAAGCTGATCAAAACACAGATTCCAAATCAAAACCTCACAAACTATTCTCATGCAACTTTTGCATGAGAAAGTTTTACAGTTCACAAGCCTTAGGTGGTCATCAGAATGCACACAAAAGAGAAAGAGGAGCAGCAAGGAGTCACCAATCTCATAAGATGATGATGATATCACTGAATAGATCACTTGGAATCAAACCTCACTCTCTTGTACATCAACCAAACCAAGAAAGTTCTTCTATGGTGGCTAGATTCAATGATGCAAATTCTGAGAATGGAATGTTATGGACACCCTTTATGCATGTAGATTCAATATGGCCAGGAAGCTTTAGGGTGGACTTACCAAAACAAGAATCAGATATCAGTAAGCTTGACTTAGATCTTAGGCTTTGA 546 0.3791 MTFIREDEEVDDEKSTNKQDIDGGSHSSQTYEDGNLGELLSLGLQGDMHNESEADQNTDSKSKPHKLFSCNFCMRKFYSSQALGGHQNAHKRERGAARSHQSHKMMMISLNRSLGIKPHSLVHQPNQESSSMVARFNDANSENGMLWTPFMHVDSIWPGSFRVDLPKQESDISKLDLDLRL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0729 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Lan10g0729 181 MobiDBLite consensus disorder prediction 21 35 - -
Lan10g0729 181 MobiDBLite consensus disorder prediction 1 20 - -
Lan10g0729 181 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Lan10g0729 181 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 181 - -
Lan10g0729 181 Gene3D Classic Zinc Finger 47 130 - -
Lan10g0729 181 MobiDBLite consensus disorder prediction 1 38 - -
Lan10g0729 181 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 181 - -
Lan10g0729 181 SUPERFAMILY beta-beta-alpha zinc fingers 65 94 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0729 Lan-Chr10 8807411 8808667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0729 56 172 C2H2 Transcription Factor Family AT1G24625 37.984 3.05e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0729 - - ccaj:109809498 196.823