Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0723 ATGGAAGAGCCTATTGTGGTTAACAAAGGAGAGGAGCCTCTTGATCTGCCTCCAGGTTTTAGGTTCCACCCCACAGATGAGGAGATCATAACTTGTTATTTGACTGAAAAAGTGATGAATAATAATTTTAGTGCAACTGCTATTGGTGAAGCTGATTTGAACAAGTCTGAGCCTTGGGATTTACCAAAGAAGGCAAAGATGGGTGAGAAACACTGGTACTTCTTCTGCCAAAAAGATAGAAAGTATCCAACAGGGATGAGAACCAATCGAGCAACTGAATCTGGTTACTGGAAAGCCACTGGAAAAGACAAGGAGATTTATAAAGGGAAAGGAAATCTTGTTGGGATGAAGAAAACCCTTGTGTTCTATAGAGGAAGAGCTCCTAAGGGAGAGAAGACCAATTGGGTCATGCATGAGTTTAGATTGGAAGGGAAATTTGCATGTTTCAATCTCCCAAAGGCCGCAAAGGATGAATGGGTTGTGAGCAAGGTTTTTCACAAGACCACAGATGTTAAAAAGACTCAATCAATTTCTGGCCTTTTGAGGATTAACTCTATTGGAGATGACATTCTTGATTGTTCTTCAATCCCACCCCTCATGAATCTTCCCTACAGCAACAATACATTCGACAATGACCTCAAGGGTATCACCAACCCACAATTATCATCAGCTAAATCTTCATCTGATGGCTATTATCTTCCAAGTTTCTCCATCAACAATCATCACCAGTTCTTTATCAAGCCCGAAAACCACAGATCTTATGAGAACAATCCAATCAACAACAACAACTACCTTTACAATGAAGTTAGTTTCAGCAAAACCACTCTCTTGCAACCTCAATTTAGAATCCAAAACCAAAGCCCATCTTTCCAGCAAAACATGTTCCCAGATAATTACTATGTGCAACAAAACAAGATGAACAATTCCATGCCAATTACTGGTTTTGGTGGCAATACTAGTAACTATGATGATGATGCTTTCCTAAGAGCATTTGCAACTAAGAATGAGTACATATCTGGATTGGACAAACAACAGTGCAAGATGGAGCAATCTGTGGTGAGTGTGTCCCAAGACACTGGCATTAGCAACGACAGAAACACAGACACATCCTCGGCCGTGTCGAAACAAGACATGGGATCAGGAATGAATAGGTCATTGTACGAGGATCTTGAAGGTCCATCATCATCTGTTGCTGCACCTCTTTCAGATTTGCATTGCTTATGGGATTGA 1230 0.4073 MEEPIVVNKGEEPLDLPPGFRFHPTDEEIITCYLTEKVMNNNFSATAIGEADLNKSEPWDLPKKAKMGEKHWYFFCQKDRKYPTGMRTNRATESGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFACFNLPKAAKDEWVVSKVFHKTTDVKKTQSISGLLRINSIGDDILDCSSIPPLMNLPYSNNTFDNDLKGITNPQLSSAKSSSDGYYLPSFSINNHHQFFIKPENHRSYENNPINNNNYLYNEVSFSKTTLLQPQFRIQNQSPSFQQNMFPDNYYVQQNKMNNSMPITGFGGNTSNYDDDAFLRAFATKNEYISGLDKQQCKMEQSVVSVSQDTGISNDRNTDTSSAVSKQDMGSGMNRSLYEDLEGPSSSVAAPLSDLHCLWD* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0723 409 MobiDBLite consensus disorder prediction 356 381 - -
Lan10g0723 409 SUPERFAMILY NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Lan10g0723 409 MobiDBLite consensus disorder prediction 356 396 - -
Lan10g0723 409 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 363 - -
Lan10g0723 409 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Lan10g0723 409 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 7 363 - -
Lan10g0723 409 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
Lan10g0723 409 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0723 Lan-Chr10 8563296 8565601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0723 1 330 NAC Transcription Factor Family AT5G18270 52.770 1.13e-109 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan10g0723 NAM 5.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0723 - - aprc:113861501 572.392