Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0711 ATGATTATCTCTGTATCAGCCTCCTCTATTTGCAAACAAGTACAACCTTTGGTAAATTTTGAAAGGGGACTCACCAAAATGGATTCTTTATTCAACCATAGGAAGAAGGATAAAGTGGTTGTAATATTAGGGGCTACTGGCACAGGCAAAACTAAGCTAGCCATAGACCTAGCCCACCATTTTCCACCAGCTGAAATAGTTAACTCAGATAAAATGCAAGTGTACAAGGGCCTTGATATCACTACCAATAAGGTCACTAAAGAAGAGTGTGGTGGTGTTACACACCACCTTCTAGGAATCGTTGATCCTAACTCAAATTTCACTGCCAATGATTTTTGTCACCATGCCACTTCAGCCATTGGTTCCATCATAGGGAGGGATGGTTTGCCCATCATTGCTGGTGGGTCCAACTCCTATATTGATGCTTTGGTTAACCACCACCCAGATTTTAGGTTAAATTATGAGTGCTGCTTTCTTTGGGTGGATGTGTCACTCCCAGTGCTCCATTCTTCCCTCAACGCACGTGTGGATCGCATGATTGAAGCTGGACAAGTTGATGAAGTTCGTGAATTCTTTGACCCTTATGCTGATTACACCAAAGGGATTCGAAGGGCCATTGGGGTACCTGAGTTTGATGAGTTTCTAAGAGCAGAAGCCACAACCGATGAAAAAACTAAGAACAAGATTCTAGAGGATGCAATTTCTAGGATCAAAGTCAATAATTGCACTCTTGCCAATCTTCAGGTTCAGAAGATTCAACGCCTTTACACTTTGTGGAAGAGGAACATGCATCGCCTTGATGCCACTGAGGTGTTTCTGAAGAAAGGGTATGAAGAAGTGTGGGAGGAACATGTGCTAGCAAAGAGCTTAAGGGTCATGCACAAGTTCCTATACAATGACAAAAACCACGTTTCTAGCGAAAATGGTATATCCTCCTACACTATAAGAAAAGTATCATGTATCATAAAATGA 972 0.4187 MIISVSASSICKQVQPLVNFERGLTKMDSLFNHRKKDKVVVILGATGTGKTKLAIDLAHHFPPAEIVNSDKMQVYKGLDITTNKVTKEECGGVTHHLLGIVDPNSNFTANDFCHHATSAIGSIIGRDGLPIIAGGSNSYIDALVNHHPDFRLNYECCFLWVDVSLPVLHSSLNARVDRMIEAGQVDEVREFFDPYADYTKGIRRAIGVPEFDEFLRAEATTDEKTKNKILEDAISRIKVNNCTLANLQVQKIQRLYTLWKRNMHRLDATEVFLKKGYEEVWEEHVLAKSLRVMHKFLYNDKNHVSSENGISSYTIRKVSCIIK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0711 323 Pfam IPP transferase 73 147 - -
Lan10g0711 323 Pfam IPP transferase 153 250 - -
Lan10g0711 323 Gene3D - 36 297 IPR027417 -
Lan10g0711 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 165 263 - -
Lan10g0711 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 304 IPR039657 -
Lan10g0711 323 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 29 304 - -
Lan10g0711 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 150 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0711 Lan-Chr10 7954235 7956252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0711 154 297 C2H2 Transcription Factor Family AT2G27760 32.164 1.27e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0711 K10760 - gmx:100812928 455.292