Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan10g0708 | ATGTCTCACATAGCTGTCGAGAGGAATAGGAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGATCCTTAACACCATGTTTCTATATTAAAAGGGGAGATCAAGCTTCTATCATAGGGGGAGTGATTGAATTCATCAAGGAGTTGCACCAAGTTCATCAAGCATTGGAGTCCCAGAAAAGAAGAAAGAGTCTAAGCCCTAGCCCTGGACCAAGTCCAAAAACACTGAAGCCAGCAATTCATCAACTTGATAGCTACTCCGGAATTGGTACTGATAATTCTTTTAAGGAACTAGGAGCAAGTTGCAACTCATCTGTTGCTGATGTGGAAGTGAAAATCTCAGGTTCAAATGTTATTCTGAAAGTGATTTCTCATAGAATTATGGGTCAAGTTGCAAAGATCATAAGTGTTTTGGAAAGTCTTTCATTTGAAGTCCTTCATCTGAACATCAGTAGCATGGAGGACACAGTCTTATACCATTTTGTTGTTAAGATAGGGCTGGAATGTCAACTAAGTCTTGAGGAACTAGCAATGAAAGTACAACAAAGCTTCAGCTCTGAGGCAATTACTGCACTTTGA | 579 | 0.3921 | MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVHQALESQKRRKSLSPSPGPSPKTLKPAIHQLDSYSGIGTDNSFKELGASCNSSVADVEVKISGSNVILKVISHRIMGQVAKIISVLESLSFEVLHLNISSMEDTVLYHFVVKIGLECQLSLEELAMKVQQSFSSEAITAL* | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan10g0708 | 192 | PANTHER | TRANSCRIPTION FACTOR FAMA | 1 | 189 | IPR044283 | GO:0003700|GO:0010052 | |
Lan10g0708 | 192 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 1 | 67 | IPR036638 | GO:0046983 | |
Lan10g0708 | 192 | MobiDBLite | consensus disorder prediction | 57 | 77 | - | - | |
Lan10g0708 | 192 | PANTHER | TRANSCRIPTION FACTOR MUTE | 1 | 189 | - | - | |
Lan10g0708 | 192 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 1 | 49 | IPR011598 | GO:0046983 | |
Lan10g0708 | 192 | Pfam | Helix-loop-helix DNA-binding domain | 2 | 49 | IPR011598 | GO:0046983 | |
Lan10g0708 | 192 | SMART | finulus | 4 | 55 | IPR011598 | GO:0046983 | |
Lan10g0708 | 192 | Gene3D | - | 1 | 64 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan10g0708 | Lan-Chr10 | 7784004 | 7786718 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan10g0708 | 1 | 189 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G06120 | 67.005 | 1.96e-88 | 256 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Lan10g0708 | HLH | 4.5e-08 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan10g0708 | - | - | gmx:100810771 | 314.309 |