Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0694 ATGTCAATTTCTCTTGCAGCGATATTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAGTTATTATTCTTATATGGTACTGTCTGTCTCACCGTAGGAGTGCTTCAAGGACTTCAGAAACAGGTTCCTCCGATCCTTCCCAAGTGGAAAGACAGGGTGTAATTGAGTTGCCAATTCGAGATACTAGGCGTTTTGACATGGAAGAACTATCTCTGGCCACAAATAATTTCAGTGTCAAAAATATGATTGGAGAAGGAAAATTCGGGGAGGTTTACAAGGGTTTACTTCAAGATGGGATGCTTGTTGCCATCAAAAAGCGCCGTGGACTCGATAGTCAGGAATTTGTTGATGAGGTACGCTATCTCTCATCTATACAGCATCGGAATCTTGTTACTCTTATAGGTTACTGCCAGGAAAACAATCTACAGTTTCTTGTATATGAATATGTGCCTAACGGAAGTGTCTCCAGTCACTTGTATGGTGCCGGTCAACAACTGCAAGGGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCTTTGAGTCCCCGTCTGGTGCATAAGGATTTCAAAACATCTAATGTTCTTGTCGATGAAAACTTCATTGCTAAGGTCGCAGATGCTGGACTTCGTAATTTTTTTGGGAGAGTTGATCTTGCAGCCTCATCTTCTCTAGTGGAAGCAGATGAAATATTCCTTGCGCCCGAGGTGAAAGAATTCAGAGGATTTTCTGAAAAGAGTGACATATACAGCTTTGGGGTATTTTTGTTGGAATTATTAAGTGGGAAAGAGGCAACAGAATCAGCATCCTTGTACTCTAGCCAAAATCTGGTTGAATGGGTGCAAAATAATCAAGACCATGGCGTTATATCTAACATCATTGATCAGAGATTGGGGAGTTTTACAGCCGAAGGCATGGAAGACTTCATCCTGCTAATAGTTAGATGTTTAGATCCTTCAAGCGAGAGACGACCTGCAATGAGCTATGTGGTAACGGAACTTGATCGGACACGTGATAAAGAAATGAATTTGACAACAATTATGGGTGAAGAAGGAACCCCAACTGTGACACTTGGAAGTCAGTTATTCAAAGCAACAGCATAA 1140 0.4202 MSISLAAILGGAAGAVALVGIVIILIWYCLSHRRSASRTSETGSSDPSQVERQGVIELPIRDTRRFDMEELSLATNNFSVKNMIGEGKFGEVYKGLLQDGMLVAIKKRRGLDSQEFVDEVRYLSSIQHRNLVTLIGYCQENNLQFLVYEYVPNGSVSSHLYGAGQQLQGKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKDFKTSNVLVDENFIAKVADAGLRNFFGRVDLAASSSLVEADEIFLAPEVKEFRGFSEKSDIYSFGVFLLELLSGKEATESASLYSSQNLVEWVQNNQDHGVISNIIDQRLGSFTAEGMEDFILLIVRCLDPSSERRPAMSYVVTELDRTRDKEMNLTTIMGEEGTPTVTLGSQLFKATA* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0694 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lan10g0694 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 378 - -
Lan10g0694 379 Pfam Protein tyrosine and serine/threonine kinase 80 346 IPR001245 GO:0004672|GO:0006468
Lan10g0694 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Lan10g0694 379 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 378 - -
Lan10g0694 379 Gene3D Phosphorylase Kinase; domain 1 39 150 - -
Lan10g0694 379 Gene3D Transferase(Phosphotransferase) domain 1 151 364 - -
Lan10g0694 379 SUPERFAMILY Protein kinase-like (PK-like) 58 346 IPR011009 -
Lan10g0694 379 ProSiteProfiles Protein kinase domain profile. 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0694 Lan-Chr10 7195562 7199836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0694 66 360 Trihelix Transcription Factor Family AT5G38560 38.689 4.37e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lan10g0694 PK_Tyr_Ser-Thr 6.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0694 - - gmx:100305436 585.874