Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0686 ATGGCCAACTTGGAGAGCAAAATGGCAAGCACGGAATGTAATAAAGGTGATGCCTTAAATGCTAAAGGGCTTGCAGAGGAGAAGCTTCTAAAGAAGGACTATGGTGGGGCAAGGATATTCGCAATGAAGGCTCGAGACTTGGATCCCAATCTTGCTGGCCTTCCTCAATTGCTGGCAGTCATTGAGGTGAATATCTCTGCTGAAAGAAGAGTCAATGGACAAGTTGATTGGTACGGGGTCCTTGGCGCGCAACCCTTGGCAGATGACGCAACAATTCGAAGATGTTATCGGAAACTGGCTCTTATGCTGCACCCAGATAAGAATAAATCTGTAGGTGCAGTTGACGCATTTAAACATATCACACAGGCATGGAGTTTATTATCAGATAAAGACAAGAAAGTCATCTATGACCAAAACCGAAATTCATGGGGTAGATATGAAGAAGTTCCAGGCCGGAAACCTTCTGTACCAGCTCATCAGAGTGGTTTCTGTAATAATATATTCAACACTGCTAACTGCAAGGATAGAGATCCTAGGAATGGTACTCAGCCCATTCCTTCACCAGTATCTCCTGTGACATTGAAACAGACATTTTGGACCAGGTGCAATTCCTGCAGGACACAATTTGAGTACCGTACTGCTTATATCAACTGCAAACTTATTTGCACCAGCTGCCGTCAGTCCTTTTTGGCTCACGAGGAACCACCACCACCTGTATACAAAAATGGTTCATCCACTTCAAGAATTTCTCAAATGAAGCAATATAACTTCAACTCTACCAGAATTGAAAGAAACTGTCATGCTTCAGGAAGGACCCCAATGCATTCTGTCAACTCATCACTTGGGCCAGGTCATTTCTCTACTCCCGGTGGTATTTCCAGTGTACCGACACCAGCTTCTGCTGCTTCTGAAGAACCTGCTGTTTATGGAATGTCATCTGGTAATTTGAAGAGACGGCGTGAAGATTCAACACCTATCATCAGGGAGGAGGGCCATTTTGAGAAAGCTCATGCTGTTGTGAGAAATGTTTCTGGTTCAACTTCCAAGTCCTCATGTTTTGGTCCAAACTCTGTTCTGATAGGAGATAATTCAAGGAAAAGGCGCCCAGATGAAAATCCAGTACGTGCTGATGGAAGGGTTAATGCCGCCGGAAGTTACAAACGGAATGGTACTAGGGAAGTATCACAGTTGCAAATGAAAAGCATGTTGATGGAAAAGGCTCGAAAGGAGATTCGTAAAAAGCTTGATGAATTGAAGGCTTCTTCTATACCAAGGAACTTAGAAAAGCCAAAGAACACTGTTGCTGAAGTCAGAGAGAAGAACAGACAGCGGGCTATTAGTAGGGTAAAACATGCTGCCCCAGAATCTGTTGATTCCGAGACCATAGGCAATAAGTGTTTCTCTGCTGACTCAGAAGTGACTGAGTCTATCACCATGAGTGTTCCAGACCCAGATTTCCATGATTTCGATGGGGACCGTATTGAAAACGCCTTTGGTGAGAATCAAATTTGGGCTGCTTATGATGATGATGATGGCATGCCACGCTTCTATGCTTTAATCAACAGTGTGATCTCAACAAAACCTTTCAAAATGAAGATTAGTTGGCTTAGCTCCAAGACCAATGATGAATTGGCCCCAATTAAGTGGGTCAGTGCTGGCTTCGCCAAAACTGTTGGGGACTTACGAATTGGCAAGCGTGAAATTTCTACCACTCTTAATACCTTCTCACACAGGGTTAAGTGGACTAAAGGTTCCAGAGGGATTATACACATATATCCTAAAAAGGGGGACGTCTGGGCTCTGTTTCGAAACTGGTCTGTTGAATGGAATGAATTTACGGAAGATGAAATCATACATAACTATGACATGGTGGAAGTGCTTGAAGACTACAGCGACGAGCAAGGCGTAGATGTTGCCCCGCTTGCTAAAGTTGCAGGTTTCAAGACAGTATTCCGCCAGAATGCAGATCCAACAAAAATCAGGAATATTCCGAAGGCAGAGATGTTTCGCTTCTCACACCAGGTACCTTCATACTTGCTTACCGGTCAAGAAGGTCCTAATGCTCCTAGTAGTTGCTTGGAGCTTGATCCTGCTGCCACACCCATGGAACTTCTCCAGACAGCCATAAAAGATGCTCCAGAGCAAGAAATGACAACAGAGAAATCTTCAAAAGATGAACCACAGCCTAATGTTAATTCCAGGGAGGATACTGTTGATGTTCCCAGAAAAGAGGCCGTAGAAGCAATGAAGAGAAAAGAAAGCAGACCTGAGATTTTGTTTGTATACAAGCGGACCCGGAAACGTCAGAAGGTCTGA 2316 0.4404 MANLESKMASTECNKGDALNAKGLAEEKLLKKDYGGARIFAMKARDLDPNLAGLPQLLAVIEVNISAERRVNGQVDWYGVLGAQPLADDATIRRCYRKLALMLHPDKNKSVGAVDAFKHITQAWSLLSDKDKKVIYDQNRNSWGRYEEVPGRKPSVPAHQSGFCNNIFNTANCKDRDPRNGTQPIPSPVSPVTLKQTFWTRCNSCRTQFEYRTAYINCKLICTSCRQSFLAHEEPPPPVYKNGSSTSRISQMKQYNFNSTRIERNCHASGRTPMHSVNSSLGPGHFSTPGGISSVPTPASAASEEPAVYGMSSGNLKRRREDSTPIIREEGHFEKAHAVVRNVSGSTSKSSCFGPNSVLIGDNSRKRRPDENPVRADGRVNAAGSYKRNGTREVSQLQMKSMLMEKARKEIRKKLDELKASSIPRNLEKPKNTVAEVREKNRQRAISRVKHAAPESVDSETIGNKCFSADSEVTESITMSVPDPDFHDFDGDRIENAFGENQIWAAYDDDDGMPRFYALINSVISTKPFKMKISWLSSKTNDELAPIKWVSAGFAKTVGDLRIGKREISTTLNTFSHRVKWTKGSRGIIHIYPKKGDVWALFRNWSVEWNEFTEDEIIHNYDMVEVLEDYSDEQGVDVAPLAKVAGFKTVFRQNADPTKIRNIPKAEMFRFSHQVPSYLLTGQEGPNAPSSCLELDPAATPMELLQTAIKDAPEQEMTTEKSSKDEPQPNVNSREDTVDVPRKEAVEAMKRKESRPEILFVYKRTRKRQKV* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0686 771 MobiDBLite consensus disorder prediction 345 378 - -
Lan10g0686 771 CDD DnaJ 76 129 IPR001623 -
Lan10g0686 771 Pfam DnaJ domain 76 137 IPR001623 -
Lan10g0686 771 ProSiteProfiles dnaJ domain profile. 76 140 IPR001623 -
Lan10g0686 771 ProSitePatterns Nt-dnaJ domain signature. 117 136 IPR018253 -
Lan10g0686 771 Gene3D DnaJ domain 73 179 IPR036869 -
Lan10g0686 771 PANTHER HEAT SHOCK PROTEIN-LIKE 12 728 - -
Lan10g0686 771 SUPERFAMILY Chaperone J-domain 69 142 IPR036869 -
Lan10g0686 771 MobiDBLite consensus disorder prediction 293 320 - -
Lan10g0686 771 Coils Coil 401 421 - -
Lan10g0686 771 PANTHER BNAC03G44070D PROTEIN 12 728 - -
Lan10g0686 771 PRINTS DnaJ domain signature 78 96 IPR001623 -
Lan10g0686 771 PRINTS DnaJ domain signature 96 111 IPR001623 -
Lan10g0686 771 PRINTS DnaJ domain signature 112 132 IPR001623 -
Lan10g0686 771 Pfam Domain of unknown function (DUF3444) 477 684 IPR024593 -
Lan10g0686 771 MobiDBLite consensus disorder prediction 714 752 - -
Lan10g0686 771 SMART dnaj_3 75 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0686 Lan-Chr10 6887630 6892121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0686 1 238 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.328 1.72e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0686 - - lang:109358929 1545.02