Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0668 ATGGGAATGAAGAGCACTGGGGGAGAGATAGTTCAAGTCCAAGGAGGCCACATTGTTAGATCCACAGGCAGAAAGGATAGGCATAGCAAGGTTTACACCGCTAAAGGTCCTCGCGATAGACGGGTTAGACTCTCGGCTCACACAGCTATTCAATTCTATGATGTTCAGGACCGTTTAGGCTACGACCGACCGAGCAAGGCCGTGGACTGGCTCATCAAGAAGGCCAAATCTGCAATTGACAAGCTTGATCAACTTCCACCATGGCATCCAACTTCTCTCAATCATAACACTAATGAAGACCATGGGGCAGAGCAGAATGCAGGGTCAAGTGAAATGAATGGTACAATTGGTGAACATTCTGAGTCCTCTGGTTACAATTTTCAGCTTCAAAGGCAACTAGGTGAGGACTCTGATAACCATTTCATTCCATCACCTATTGACACTGATGCCATAGCTTTTTTTCCAACAACAACTGCTCCTTCCTCCATCAATTTCCAAAGCTACCCACCTGACATAATCTCAAGAAACCACCACAACAACTCCACTGAAGATCTTGGCCTTTCTCTTCATTCCTTCCAAGACCATGGTTTGTTTCATGGCCAATCATCGCAAGCCGGTGCAAATCAAACACCTTGTTCAAATGAGCAGACCCTTTTCTCTGGCTCAACTCCTGTTGGGTTTGATTCCAATTACCATAGGATTGTGAATTGGAACAATGAAGCAAATAATGTTGATATGAACAGAACTAGTTTCATGCTCAATAATAACTCAGCTGCATTTTTAGGCCAAGGTTGTTCTGCTTATCCTCAAAGGGGGACCCTTCAGTCCAGTTTTACTCCGTCGCTTCGTTCTTGGAACGATATTCCGATGGCTTCTTCTGAGCATCACAGGTCTCAGCCAATTCATCATGCTTCCATCTTTGGAAGCAGGTTTCTTTCTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGGATTCAAGGTGAAGAGGATGAGAATCACAGAGTTGGTTCTGATCGACCATCATCGTCTTCTCCTAATTCTCATCATTGA 1050 0.4476 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLDQLPPWHPTSLNHNTNEDHGAEQNAGSSEMNGTIGEHSESSGYNFQLQRQLGEDSDNHFIPSPIDTDAIAFFPTTTAPSSINFQSYPPDIISRNHHNNSTEDLGLSLHSFQDHGLFHGQSSQAGANQTPCSNEQTLFSGSTPVGFDSNYHRIVNWNNEANNVDMNRTSFMLNNNSAAFLGQGCSAYPQRGTLQSSFTPSLRSWNDIPMASSEHHRSQPIHHASIFGSRFLSDALPGFCIPARIQGEEDENHRVGSDRPSSSSPNSHH* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0668 349 MobiDBLite consensus disorder prediction 83 123 - -
Lan10g0668 349 Pfam TCP family transcription factor 23 119 IPR017887 -
Lan10g0668 349 PANTHER TRANSCRIPTION FACTOR TCP4 2 349 - -
Lan10g0668 349 MobiDBLite consensus disorder prediction 89 123 - -
Lan10g0668 349 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 349 IPR005333 GO:0003700
Lan10g0668 349 MobiDBLite consensus disorder prediction 328 349 - -
Lan10g0668 349 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0668 Lan-Chr10 6410408 6413020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0668 8 349 TCP Transcription Factor Family AT3G15030 41.397 1.05e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan10g0668 TCP 2.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0668 - - gmx:100814907 504.982