Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0666 ATGGCACAATTACCACCCAAGATCCCAAACATGTCACCAAGTTGGCCAGACTTTTCTTCTTACCAGAAAATGCCACCCCATGCAAGATTTGGCACAAACAACACAAACCATCAACATCATCAAAGTAGTAATAATAATAACAATAACCCTTCTTGGGTGGATGAGTTCCTTGACTTTTCCTCCGGCCGCCGCAGCGCTCACCGCCGGTCGATGAGCGATTCTATCACCTTCTTTGAGGCACTACCGATCACAATAAGGCCTGAGATTAATGACAATGAGTTTGACAAGTTTGATGATGAACAACTCATGTCCATGTTTAGTGATGAAATATATGGGGTCAATGTGCCACCAACCTTGTCCTCCTCAAACCCTTCAAGCCCTTCAGATCAGAACTTCAACAATGATGAGAAAGAGGTGATGGAGGAGCAGAAGAAACAGGAGGAGGAGATACAGAAACATCAATTGAAAAATGAACCAGATGAGGTTGAAAGTGAATGCAAACAGGAATTTCCAACACCTCCAAATAACACAAATATTACTAGAACTACATCCAATGACAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTAGCTAATAGACAATCTGCACAAAGATCGCGAGTGAAGAAGCTACAATACATTTCAGAGCTTGAGCGAAGTGTAACTTCATTACAGACCGAAGTTTCAGCGTTGTCTCCACGGGTTGCGTTTTTAGATCATCAACGTTTGCTTCTTACTGTTGACAACAATGCTCTTAAGCAAAGAATCGCTGCCCTTGGCCAAGATAAGATCTTCAAAGATGCTCATCAAGAAGCCCTGAAGAGAGAGATAGAGAGATTGAGGCAAGTGTATCAGCAACAAAATCTTCAGCAGATGGAAAATGTTGCAGGATGTGATGCTCAAACTGAAAAGGAACAACAACAGATTCTTAACGTTTGA 942 0.4183 MAQLPPKIPNMSPSWPDFSSYQKMPPHARFGTNNTNHQHHQSSNNNNNNPSWVDEFLDFSSGRRSAHRRSMSDSITFFEALPITIRPEINDNEFDKFDDEQLMSMFSDEIYGVNVPPTLSSSNPSSPSDQNFNNDEKEVMEEQKKQEEEIQKHQLKNEPDEVESECKQEFPTPPNNTNITRTTSNDRITDPKRVKRILANRQSAQRSRVKKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLLLTVDNNALKQRIAALGQDKIFKDAHQEALKREIERLRQVYQQQNLQQMENVAGCDAQTEKEQQQILNV* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0666 313 SUPERFAMILY Leucine zipper domain 192 246 IPR046347 GO:0003700|GO:0006355
Lan10g0666 313 SMART brlzneu 188 252 IPR004827 GO:0003700|GO:0006355
Lan10g0666 313 Pfam Basic region leucine zipper 189 237 IPR004827 GO:0003700|GO:0006355
Lan10g0666 313 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Lan10g0666 313 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 309 - -
Lan10g0666 313 MobiDBLite consensus disorder prediction 26 51 - -
Lan10g0666 313 MobiDBLite consensus disorder prediction 1 51 - -
Lan10g0666 313 MobiDBLite consensus disorder prediction 134 167 - -
Lan10g0666 313 Gene3D - 191 264 - -
Lan10g0666 313 CDD bZIP_plant_RF2 193 243 IPR044759 GO:0003700|GO:0006355
Lan10g0666 313 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 242 IPR004827 GO:0003700|GO:0006355
Lan10g0666 313 MobiDBLite consensus disorder prediction 114 133 - -
Lan10g0666 313 Coils Coil 133 158 - -
Lan10g0666 313 MobiDBLite consensus disorder prediction 169 185 - -
Lan10g0666 313 PANTHER BASIC LEUCINE ZIPPER 34 1 309 - -
Lan10g0666 313 Coils Coil 267 291 - -
Lan10g0666 313 MobiDBLite consensus disorder prediction 114 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0666 Lan-Chr10 6389177 6392286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0666 1 269 bZIP Transcription Factor Family AT3G58120 54.452 3.69e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan10g0666 bZIP_2 1.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0666 - - cam:101507538 366.696