Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0664 ATGAGGTGTTGCAGTTTGAGTGAAGTTATCTCACTCTCACTCACTCCTCCTCCTCTCTCTTCATACACCAACATACACACTCTTTCCTTCAATCTCCATTTCCAATTCCATAACCCTCTCTTCAAATTCCATAACACATCTTCTTCTTCTTTCTCCATTTCCCATCATCATCATCGTGTGGCACCCGCTGTTGCACCCGCACAACCTTCAATTTCAACCGTTGATTTTGATTATGGTGAATATGTGGTTGTCAATTTCTACCATTTTTTGTTTATCAAAGACCCTCATGCTGAAGTTCATAAACACCTTTCTTTCTTGCACCTCCAGGGACTCGACATCCATGGAAGAATCTATTTGAATGAACAAGGGATTAATGCACAGTATAGTGGGCCATCGAAAGATGCTCTGGCGTATCTCAACTGGCTAAGAGAGGATAACAGGTTTTCTGACATCCTGGCTCAGATATCTCCATCAGAAACTGGACATGCCTTTCCGAAATTGAAGTTGCGATATAAGCCCACGTTAGTACAGTGTCAAGGTGGCATATCACATCTTCCCTTGCTTGATCCTTCAGCGCGGGCAATACCTTTAGCACCTTCCGAATGGAAAAATAAACTGGAAGCAATCAATAAAATAGATCTTATATCAGAAGAACATCCTAACAGAAATAACATTATATTGGATGTGAGAAATGGTTATGAGTGGGATGTTGGACATTTTCATGGGGCGCAGCGACCTAATGTTGACTGCTTTAGGAACACTTCATTTGGTCTGTCTGAGGAAGAGATCACTGCTTCAGACCCTTTATCAAATGTAGATAAAGAAAAGGCAAACATATTGATGTATTGTACTGGAGGGATTCGCTGTGATGTATATTCTACTATACTAAGGCAACAGGGATTTCAGAATTTGTATACCTTGGAAGGAGGCATTTCTCACTATTTAAAGAATGAAGGTCCTGCAGAATGGGTAGGAAATTTATTTGTATTTGACTCCCGTTTGGCCCTCCCTCCTTCAGTGTTCCATTCCCGGGCCACAACTGAAGCAGAGATGACTCAAATTTCTGGAGATGATAAGTTTGCAAAATGCTACATATGTTGTTCAGAAGTCACTGAATTGAGACACAGGAACTGTGCAAATCTCGACTGTAATCTACTTTTCCTATGCTGTAGAAAATGTGTGAAAGAGTTAAGAGGATGTTGTTGTTTGAGTTGCACTACTGCTCCTAGGCTTAGACCTGTTCTAAATGGAGAACATAGATATAAAAAATGGCACATTTATCGTGACATGGATATGCTAGAGAAGATGAAAATTTCAACTTGA 1323 0.4036 MRCCSLSEVISLSLTPPPLSSYTNIHTLSFNLHFQFHNPLFKFHNTSSSSFSISHHHHRVAPAVAPAQPSISTVDFDYGEYVVVNFYHFLFIKDPHAEVHKHLSFLHLQGLDIHGRIYLNEQGINAQYSGPSKDALAYLNWLREDNRFSDILAQISPSETGHAFPKLKLRYKPTLVQCQGGISHLPLLDPSARAIPLAPSEWKNKLEAINKIDLISEEHPNRNNIILDVRNGYEWDVGHFHGAQRPNVDCFRNTSFGLSEEEITASDPLSNVDKEKANILMYCTGGIRCDVYSTILRQQGFQNLYTLEGGISHYLKNEGPAEWVGNLFVFDSRLALPPSVFHSRATTEAEMTQISGDDKFAKCYICCSEVTELRHRNCANLDCNLLFLCCRKCVKELRGCCCLSCTTAPRLRPVLNGEHRYKKWHIYRDMDMLEKMKIST* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0664 440 Pfam Rhodanese-like domain 221 315 IPR001763 -
Lan10g0664 440 Pfam UPF0176 acylphosphatase like domain 81 173 IPR040503 -
Lan10g0664 440 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 79 430 IPR020936 -
Lan10g0664 440 Pfam Rhodanase C-terminal 325 406 IPR022111 -
Lan10g0664 440 SMART rhod_4 210 320 IPR001763 -
Lan10g0664 440 CDD RHOD_YceA 197 316 - -
Lan10g0664 440 Gene3D - 74 176 - -
Lan10g0664 440 ProSiteProfiles Rhodanese domain profile. 220 323 IPR001763 -
Lan10g0664 440 Gene3D - 190 354 IPR036873 -
Lan10g0664 440 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 79 430 - -
Lan10g0664 440 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 187 337 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0664 Lan-Chr10 6332150 6337047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0664 77 429 Sulfurtransferasese or Rhodanese AT1G17850 66.209 7.62e-180 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0664 - - gmx:100814358 652.514