Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0661 ATGGAGTATGCAAGTAGTGGAGGAGGAGGTGGGTCCCATTCCCCAAGAGAACACCATCGAGAAGATCACGAAGATGGTTCTGATTCCCAAAGAAGAAACAAACGCTACCATCGTCATACTTCTAACCAAATTCAAAGGCTTGAATCAGTGTTCAAAGAGTGTCCACATCCGGATGAAAAGCAAAGGATGCAGCTAAGCAGAGAATTAGGTTTAGCACCAAGACAGATAAAATTCTGGTTCCAAAATAGAAGGACCCAGCTAAAGGCTCAACACGAAAGACAAGATAACTCCACACTACGAGCAGAGAATGACAAAATACGTTGTGAGAATATTGCTTTTAGGGAGGCCATGAAAAATTGTATATGCCCTAATTGTGGTCCAACTCCTCTTAATGAAGATTCTTATTTTGATGACCAAAAGATGAGATTAGAGAATCTCCACCTCAAAGAAGAGCTTGATAGAGTGTCTAGTATTGCAGCTAAATACATTGGAAGACCAATTTCTCAACTCCCTTCAATTCCACCTTTTCATATATCCCCTTTGGATTTGTCTATGGGCACTAGTACTTTTGGAACCCAACAAGGATTGTTTAACGTTGGTGGTTGTAGTGGTGTTGGTTCTTCCCTTGATCTTGATCTTCTACAAGGGATTTCTTCTAATTCTATGCCAAATTTTCCATACCAACCTGGTTCCCTTTCAGAAATGGATAAGTCTCTTATGTCAACTATTGCAACCAATGCCCTTGAAGAATTTCTCAGGATCTTGCACACAAATGAGCCCTTGTGGATCAAGTCTACCATTGATGGAAAAGATTTTCTTAATCTTGAGACCTATGAAAGAATGTTCCCTAAGGCAATTACTCGTGTCAAAAATCCTAATGTTCGCGTTGAAGCATCAAGAGATTCCACCGTTGTTATAATGAATAGCTCAAATTTGGCTGAAATGTTTATAGATGCAAACAAGTGGAAGGAACTTTTTTCTACTATTGTTTCATCTGCAAGGACAGTAGAGGTCCTATCTTCAGGCATCATGGGTGGTAACAATGGTTCATTGCAGTTGATGTATGAAGAGTTACAAGTGTTATCTCCACATGTTTCTGCTCGAGAGTTCTACTTCCTTCGTTACTCACAGCAGATTGAGCAAGGAACATGGGCAATAGTTGATGTTTCATATGATTTTCCACAAGACAACCAATTTTCTCCACAACTTCGCTCTCACCGTTTTCCTTCGGGGTGTTTAATCCAAGACTTTACAAATGGGCAATCCAAGGTTACATGGATCGAGCATGTAGAGGTTGAAGACAAAACTCTTCCCCATAGGTTTTTCAAAAACCTAATATTTAATGGATTGGCATTTGGGGCAGAAAGATGGCTTGCTACACTTCAAAGAATGTGTGAAAGAAATGCTTGTCTAATGGTCACAACCAATCCCACCCATGATTTTGGAGGAGCAATAACATCACCTGAGGGGAAGAGGAGCATGATGAAACTTGCTCAAAGGATGGTAACAAATTTCTGTGCTAGTATTAGCACATCAAATGGTCAAAGATGGACCATACTGTCTGGATTAGATGAGGTTGGAGTAAGAGTCAATGTCCATAAGAGTACAGATCCAGGACAACCTAATGGTGTAGTTCTAAGTGCTGCCACTACCATATGGCTCCCTATCCCTCCACACATTGTATTCAATTTTTTCAAAGATGAGAGAAAAAGACCCCAGTGGGATGTTCTTTCCAATGGTAATCCTGTGCAAGAGGTTGCACACATAGCAAATGGTTCTCACCCTGGTAACTGCATATCAGTTCTTCGAGCTTTCAGCAACACTCAGAACAACATGTTAATACTCCAAGAGAGTTGTATAGATTCTTCTGGTGCGCTTGTGGTATATTGTCCAATTGATCTTCCATCCATCAACATAGCAATGAATGGTGAAGACCCTTCATACATTCCTCTACTACCATCTGGATTTTCCATTTCCCCTGATGGCCAACAAGACCAAGGAGGAGGGGAAGATGGAGCATCAACTAGCTCAAGCACGAGCAAGAACATAGGTAGATGTAGTGGTTCTTTGGTCACAGTTGCATTCCAAATACTAGTGAGTAATTTGCCATCAGCAAAACTCAACATGGATTCAGTGACAACAGTTAATAATCTTATTAGCACCACTATCCATCAAATTAAGGCTTCCTTGAATTGTCCAACTTCCTCATGA 2211 0.4062 MEYASSGGGGGSHSPREHHREDHEDGSDSQRRNKRYHRHTSNQIQRLESVFKECPHPDEKQRMQLSRELGLAPRQIKFWFQNRRTQLKAQHERQDNSTLRAENDKIRCENIAFREAMKNCICPNCGPTPLNEDSYFDDQKMRLENLHLKEELDRVSSIAAKYIGRPISQLPSIPPFHISPLDLSMGTSTFGTQQGLFNVGGCSGVGSSLDLDLLQGISSNSMPNFPYQPGSLSEMDKSLMSTIATNALEEFLRILHTNEPLWIKSTIDGKDFLNLETYERMFPKAITRVKNPNVRVEASRDSTVVIMNSSNLAEMFIDANKWKELFSTIVSSARTVEVLSSGIMGGNNGSLQLMYEELQVLSPHVSAREFYFLRYSQQIEQGTWAIVDVSYDFPQDNQFSPQLRSHRFPSGCLIQDFTNGQSKVTWIEHVEVEDKTLPHRFFKNLIFNGLAFGAERWLATLQRMCERNACLMVTTNPTHDFGGAITSPEGKRSMMKLAQRMVTNFCASISTSNGQRWTILSGLDEVGVRVNVHKSTDPGQPNGVVLSAATTIWLPIPPHIVFNFFKDERKRPQWDVLSNGNPVQEVAHIANGSHPGNCISVLRAFSNTQNNMLILQESCIDSSGALVVYCPIDLPSINIAMNGEDPSYIPLLPSGFSISPDGQQDQGGGEDGASTSSSTSKNIGRCSGSLVTVAFQILVSNLPSAKLNMDSVTTVNNLISTTIHQIKASLNCPTSS* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0661 736 Pfam START domain 244 467 IPR002913 GO:0008289
Lan10g0661 736 Gene3D - 17 106 - -
Lan10g0661 736 MobiDBLite consensus disorder prediction 13 32 - -
Lan10g0661 736 Gene3D - 241 468 IPR023393 -
Lan10g0661 736 MobiDBLite consensus disorder prediction 1 43 - -
Lan10g0661 736 CDD homeodomain 34 91 IPR001356 GO:0003677
Lan10g0661 736 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 9 733 - -
Lan10g0661 736 Pfam Homeodomain 34 88 IPR001356 GO:0003677
Lan10g0661 736 CDD START_ArGLABRA2_like 237 466 - -
Lan10g0661 736 ProSitePatterns 'Homeobox' domain signature. 65 88 IPR017970 GO:0000981|GO:0006355
Lan10g0661 736 SUPERFAMILY Homeodomain-like 16 90 IPR009057 -
Lan10g0661 736 SMART HOX_1 31 94 IPR001356 GO:0003677
Lan10g0661 736 ProSiteProfiles 'Homeobox' domain profile. 30 90 IPR001356 GO:0003677
Lan10g0661 736 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 9 733 IPR042160 -
Lan10g0661 736 SUPERFAMILY Bet v1-like 488 727 - -
Lan10g0661 736 SMART START_1 242 467 IPR002913 GO:0008289
Lan10g0661 736 SUPERFAMILY Bet v1-like 234 468 - -
Lan10g0661 736 MobiDBLite consensus disorder prediction 659 683 - -
Lan10g0661 736 ProSiteProfiles START domain profile. 233 470 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0661 Lan-Chr10 6314296 6318208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0661 28 736 Homeobox Transcription Factor Family AT1G73360 62.151 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan10g0661 START 3.5e-45 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0661 K09338 - gmx:100785023 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0661 10 6314296 6318208 Lan3g0391 3 2950617 2954719 LSH
Lan17g0842 17 10446477 10451956 Lan10g0661 10 6314296 6318208 PCT
Lan10g0661 10 6314296 6318208 Lan17g0842 17 10446477 10451956 PCT