Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0659 ATGAGAGATATGGCTGGTTTTGAGAAGGATGAGGTGCCAATGCTGTCAGACACTCGTCCACAACGATTTGATGAGAGGTATGCGTCTAGGACACGAAGCGTGTCAATTTCTATTCCCATGGAACTATATCATAGGGAAAACAATGTTTTGGGACACACCGGTCCTCTAAGGAGTGAGAGGAAAACTCCCTTTGTGCACATGAGTGGTCCACTATATGTACCTGGAAATCTTGCAAGGCAGAATATAGTAGGAGGAGGGAGCAAAGCAGTGGAAAGCAAGGAAGAAAAGCTTCCATCTGTCGGCGGTGTGGGAGAACATGATTTGAGTAAACACAATGCTGGGAAAAATGAACATTTGCTGAGGTCTGGTCAACTAGGAATGTGTAATGATCCTTATTGTACAACTTGCCCAACTTACTTCAAGCCTACTGAAGCTCAACAAAGAAATTCCAAATCTCATGGTATCTTCGATCCCAAGTTCCACAATGCCCTTTATGGTGATGCCAAGGGTTGGGCAAGAAGATTATTGGCTTTATTGAATCCATATGTTCCTGGTGTAATGAACCCTCATACTAAGGTTGTACAACAGTGGAACAAGTTTTTTGCAATTTGTTGCTTGGTCGCAATTTTTGTCGACCCATTATATTTCTTCTTGTTCTCTGTAAAGCAGGATCACAAATGCATTGTAATAAACTGGCCGATGACAACAATACTTGTTTTACTTCGAAGCATGACTGATTTCGTATATTTTATAAACATTATTCTTCAGTTTAGGCTGGCTTATGTGGCTCCTGAGTCTAGGGTGGTTGGTGCCGGGGAATTAGTTGACCATCCTAAGAGAATCGCTCTTCACTACCTCCAGACATATTTTGTCATGGACTTATTTATTGTACTTCCACTTCCTCAGATCATAATATTGTTTGTTCTACCAAAACACATGGGGTTATCAGGAGCAAATTTTGCGAAGAACCTTTTGCGCCTCATGATCCTTTTTCAGTATATTCCAAGATTGTGTAGGTTTTTGCCTCTGGTAATATCTCCAACAGGATTCATATTTGAGTCAGCATGGGCAAATTTCTTCATAAACCTTTTCATCTTTATGCTGTCTGGCCATGCTGTTGGGTCTAGCTGGTACCTCTTTGGTTTACAGAGGGTGAATGAATGTCTACGACGTGCCTGCAGCCATTCTCATATTGAAGGATGCATGAAATTCATTGATTGTGGGGATGGAAGTGATGAAAATCATCAATCTATCCCGAATTGGACTCGTTGGAAAAACAGTTCTAATGCAAGTGATTGTTTTACTGAAGATGGATTCTCTTATGGCATCTATCTCAGAGCGGTCAACCTTACTGCAGAACATGATGTTATCACCAAATATGTATATTCCTCATTTTGGGGATTCCAGCAAATTAGTACTCTTGCTGGCAATTTAACCCCCAGCTATTTTGTTGGGGAAGTCCTTTTTACCATGGCTATCACTGGATCAGGACTTCTGCTTTTTGCTCTCCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGAAGGAGGAGGCTAGAAATGTCACTTAAACAACGTGATGTTGAGCAGTGGATGAGCCATCGGCGATTACCTCTAGATCTGAGAAGGAGAGTGAGGCATGCAGAACGCTATAGATGGGCCACAACAAGAGGGGTTAATGAAGAAATGCTTTTGGAGAATTTTCCAGAAGACCTCCAGAGAGACATTAGGCGCCATCTCTTTAAATATGTTAAGAAAGTTCGTATTTTTGCCATGATGGATGAACCTATCTTGTATGCTATCTGCGAGAGACTAAGACAAAAGACATATATAAAAGGTAGCAAAGTTTTATATCATGGTGGTTTGGTAGAGAAGATGGTCTTTGTTGTGCGTGGAAAATTGGAGAGCATCGGTGAAGATGGGATTGTTCCTTTATCTGAAGGTGATGCTTGTGGTGAAGAACTTCTGACATGGTGTCTTGAGCATTCTTCTGTAAACAAAGATGGTAGAAAAGTAAGGATTCCAAGCCAGAGGTTGCTTTGCAACAGGACAGTAGTGTGCTTAACAAATGTAGAGGCATTTTCTCTCCGAGCTGAAGACCTTGAAGAAGTTACTAGCCTTTTTGCAAGATTCTTACGGAGTCCTCGTGTTCAAGGAGCCATAAGGTATGAGTCACCCTACTGGAGATGCCTTGCTGCGACACGCATCCAGGTTTCCTGGAGATATAGGAAGAAATGTCTTAGACGTGCTGACACCTCACAATCAACTGAAACATCAAGGGTTTAG 2289 0.4172 MRDMAGFEKDEVPMLSDTRPQRFDERYASRTRSVSISIPMELYHRENNVLGHTGPLRSERKTPFVHMSGPLYVPGNLARQNIVGGGSKAVESKEEKLPSVGGVGEHDLSKHNAGKNEHLLRSGQLGMCNDPYCTTCPTYFKPTEAQQRNSKSHGIFDPKFHNALYGDAKGWARRLLALLNPYVPGVMNPHTKVVQQWNKFFAICCLVAIFVDPLYFFLFSVKQDHKCIVINWPMTTILVLLRSMTDFVYFINIILQFRLAYVAPESRVVGAGELVDHPKRIALHYLQTYFVMDLFIVLPLPQIIILFVLPKHMGLSGANFAKNLLRLMILFQYIPRLCRFLPLVISPTGFIFESAWANFFINLFIFMLSGHAVGSSWYLFGLQRVNECLRRACSHSHIEGCMKFIDCGDGSDENHQSIPNWTRWKNSSNASDCFTEDGFSYGIYLRAVNLTAEHDVITKYVYSSFWGFQQISTLAGNLTPSYFVGEVLFTMAITGSGLLLFALLIGNIQNFLQALGRRRLEMSLKQRDVEQWMSHRRLPLDLRRRVRHAERYRWATTRGVNEEMLLENFPEDLQRDIRRHLFKYVKKVRIFAMMDEPILYAICERLRQKTYIKGSKVLYHGGLVEKMVFVVRGKLESIGEDGIVPLSEGDACGEELLTWCLEHSSVNKDGRKVRIPSQRLLCNRTVVCLTNVEAFSLRAEDLEEVTSLFARFLRSPRVQGAIRYESPYWRCLAATRIQVSWRYRKKCLRRADTSQSTETSRV* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0659 762 SUPERFAMILY cAMP-binding domain-like 518 711 IPR018490 -
Lan10g0659 762 Gene3D - 198 515 - -
Lan10g0659 762 ProSiteProfiles cAMP/cGMP binding motif profile. 590 657 IPR000595 -
Lan10g0659 762 Gene3D Helix hairpin bin 518 582 - -
Lan10g0659 762 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 7 754 - -
Lan10g0659 762 Gene3D Jelly Rolls 588 711 IPR014710 -
Lan10g0659 762 Pfam Ion transport protein 197 518 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan10g0659 762 MobiDBLite consensus disorder prediction 88 108 - -
Lan10g0659 762 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 754 - -
Lan10g0659 762 CDD CAP_ED 590 705 IPR000595 -
Lan10g0659 762 SUPERFAMILY Voltage-gated potassium channels 189 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0659 Lan-Chr10 6288536 6297601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0659 8 667 Ion Channels AT3G17700 61.778 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0659 K05391 - gmx:100782506 1124