Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0656 ATGGCAGAAACAAACTCGGTTGATGTGATTTTGGACTTTCTGAGGAAGAACCGACTCACAAGAGCTGAGGCAGCTTTGCGTAGTGAGATCAACAATTGTCCTGACTTAAATGGCTTCTTTCAGAAACTTACATTGGAAGAAAAGGCCTCACGTGATATGCCACAAAATGATAAGGGGAAGCCGGGCTTAGATTTTCAAGGGGCGGATTCATGTGAAAGTGTTGAAGTTTCTAAAGAATTGATTGTGAAGGAAATAGAATACAGGACTAGTAGAAATGCAACTGAAACTAAGTGGAAATCTTCTGCTCCTTCTACAAGTGATCAGAATAAATTAAAAAATGAATTGGTTGGGGCGAGTGACAAACACTTCAATTTCTCTAAGAGTTCAGAGGACCGTATACTTGATTTATTCTCATTGAAGTCCAATCCCAGCAATGGTCCTGTTGAGCCTTGCCAAAATGGTGCTGGTAGTAGGGCTGCTAATACTTCAAAGGTTTCTGTACCTCATCATTCAAAATACCAAACTAATGAAGATGTTGCTGCAGTTGCAATCAAAAGTAATGCTAAGGCTGGTGAGGAAAGTGCTGTGCTTGCAGCTAATAAATCCTTGTGGGTTGGAAGTAGTAGTAGAGTGTCTGTGGAACCAATGTATGACCTTGTGTTGCAAAGCAAAGAACCAAGTGAACATGATCGCCAACTAAAATTTAGTAGTTCATCTCTTAAGGGGAACTTTTCAGATAATCCTGGGTCTAGAACTGATGAGAATGCGATTTCATCTTCAGACCCATGGAATTGTTCAGTCAAGACTGTTTTTCCCTTCCCGAGGGGGGATATATCTACAAGTTTTGATGCTGACAAAAATGTGGAAAAACGAAGCATAGAAATTAGTGATATTAGTGCATCTATAAAAGAGCAGGTGGATGAAGTCGGGAGACCTATTTTCTTGGGCAAGTCACACCGAAGTTCTGAACTGAAGACCATTGGCAGCTTAAGTTTTCCTTTTGTTTCTGAAAATCAGAGGGAAGTGTTTCCTAGGCTTCCTCCTGTTAAACTCAAGTCAGAAGATAAGCCTTTGGCTGTTAAGTGGGAGGAGCAGTTTGAGCGAGATGGACCAACTTCAAAATTCTCTGTTGCTGACAGCACTTTATTTATTGGTTCATATCTGGATGTGCCTATTGGGCAAGAAATTAACCCTTCAGGTATGAAGAGGGCTGCAGGGGGAAGTTGGTTGTCTGTGAGTCAAGGGATAGCAGAGGACACATCTGATCTTGTATCAGGTTTTGCAACAATTGGTGATGGGTTGAGTGAATCCATAGACTATCGAAATGAATATTGGGACTCTGATGAATATGATGACGATGATGATGTTGGGTACATGAGACAGCCTATTGAGGATGAAGCCTGGTTTTTGGCGCATGAAATTGATTATCCTAGTGACAATGAAAAGGGGACTGGGCACGGAAGTGTTCCAGATCCTCATGAAGGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGAGAGCGACTTCTTGAAGTGAGTAATGTTGAACCAGTCAAAGCTTCAGATGATCACGTTGGTCTAACAGTTACTGAAATGTATGGAAGGGCTAATGATAATGATTTAATGGCTCAATACGATGGACAGTTGATGGATGAAGAAGAATTAAATCTAATGCGTGCAGAACCTCTCTGGCAAGGCTTTGCCGCTCAGACAAATGAGCTCATCATGGTAGGAGATGGGAAGGTTTTGGATGATAGTGGAAGATCACGATTAGAGGATATCTGTATGGTTGATGATCAGCATGGTTCGGTTAGGTCTATTGGGGTAGGGGTTAACAGTGATGCTTCTGATATTGGTAGTGGGGTACATGGAAGTTTGGTTGGTGGTAGTAGTGAAGGGCATCTAAAATATTTCCGTGATTGTGATGTTCGGGTTGGTGGCTTCAGACACTCAAATCATGATTTGGATAAGAACTCTATTAGTAAATCAAACAAAAATAAGAAGAAAAATGACATGAGTGAGTCAAATAAATATGATGGGAACTTCTCATTTCCTGTATCCTCGATAGATGGCCATATACTTGAGGCTGCCTCCAAACAGTCCCCCTGGTCAAATAACTGCAATGTAGATGAAACTGATGACCGTCTTAATGCATTTGTGGGATCAGACGAAATGCTTGCTTCATGGATGCGGGAGAGCAGGGATTCTTCACCTATTAAAAGTTCTAGGGATGAGAATAATGCTAACCAAATAAGATCCAGAAACTCTTCTCCAGCAACAGTCTCAAATTACGGATATTATGAAAGAGAGCATATCAAGCCAGAAGAGGATGAAAAGGTTGATGTTTCAAGGGAGGATGATTTAGGGGCATCACTAGAGGATGAAGAGGCTGCTGCTGTGCAAGAGCAAGTACGGCAAATAAAGGCCCAGGAGGAGGAATTTGAAACCTTCGATCTAAAGATTGTGCACAGAAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGCTTTAAATTCTGTAATAGCTGGAAGGTATCATGTCACCGAGTATTTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACAGACATGGATGTCTGTGTAAAAATTATAAAGAACAACAAGGATTTTTTTGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATATCAATAAGCATGATCCTGGAGACAAGTATCACCTTCTTCGATTATATGATTATTTTTATTATCGAGAACATTTGTTGATAGTATGTGAACTACTCAAAGCAAACTTATATGAGTTTCATAAATTCAATAGAGAATCAGGGGGTGAAGTGTACTTCACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAATCACTGCAGTTTTTGCATAGCCTCGGACTGATACATTGTGATTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGTAGGTGTGAGGTGAAGGTCATTGATCTTGGAAGTAGCTGTTTTGAGACAGACCACCTTTCCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGGCTCCCATATGACAAGAAGATTGATATCTGGTCACTTGGCTGCATCTTGGCTGAACTTTGTACTGGCAATGTTCTCTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTCCGATTGATCAAAGTATGCTTGCAAAAGGACGAGATACATATAAGTACCTCACCAAAAATCATATGCTTTACGAACGGAATCAGGAAACCAACAGGTTAGAATACTTGATTTCAAAAAAGACATCTTTGAGGCATAGATTGCCGATGGGAGACCAAGGCTTCATTGACTTTATTTCTCATTTGCTTGAGATCAACCCAAAGAAGCGGCCTTCGGCTTCTGATGCCCTGAAGCACCCATGGTTATCATATCCTTATGAACCCATATCGTCTTGA 3510 0.4097 MAETNSVDVILDFLRKNRLTRAEAALRSEINNCPDLNGFFQKLTLEEKASRDMPQNDKGKPGLDFQGADSCESVEVSKELIVKEIEYRTSRNATETKWKSSAPSTSDQNKLKNELVGASDKHFNFSKSSEDRILDLFSLKSNPSNGPVEPCQNGAGSRAANTSKVSVPHHSKYQTNEDVAAVAIKSNAKAGEESAVLAANKSLWVGSSSRVSVEPMYDLVLQSKEPSEHDRQLKFSSSSLKGNFSDNPGSRTDENAISSSDPWNCSVKTVFPFPRGDISTSFDADKNVEKRSIEISDISASIKEQVDEVGRPIFLGKSHRSSELKTIGSLSFPFVSENQREVFPRLPPVKLKSEDKPLAVKWEEQFERDGPTSKFSVADSTLFIGSYLDVPIGQEINPSGMKRAAGGSWLSVSQGIAEDTSDLVSGFATIGDGLSESIDYRNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPHEGGPAKDEDDDQSFAEEDSYFSGERLLEVSNVEPVKASDDHVGLTVTEMYGRANDNDLMAQYDGQLMDEEELNLMRAEPLWQGFAAQTNELIMVGDGKVLDDSGRSRLEDICMVDDQHGSVRSIGVGVNSDASDIGSGVHGSLVGGSSEGHLKYFRDCDVRVGGFRHSNHDLDKNSISKSNKNKKKNDMSESNKYDGNFSFPVSSIDGHILEAASKQSPWSNNCNVDETDDRLNAFVGSDEMLASWMRESRDSSPIKSSRDENNANQIRSRNSSPATVSNYGYYEREHIKPEEDEKVDVSREDDLGASLEDEEAAAVQEQVRQIKAQEEEFETFDLKIVHRKNRTGFEEDKNFHVALNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTDMDVCVKIIKNNKDFFDQSLDEIKLLKYINKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLESLQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLSSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYLTKNHMLYERNQETNRLEYLISKKTSLRHRLPMGDQGFIDFISHLLEINPKKRPSASDALKHPWLSYPYEPISS* 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0656 1169 MobiDBLite consensus disorder prediction 662 687 - -
Lan10g0656 1169 Gene3D Phosphorylase Kinase; domain 1 852 939 - -
Lan10g0656 1169 MobiDBLite consensus disorder prediction 48 67 - -
Lan10g0656 1169 MobiDBLite consensus disorder prediction 479 509 - -
Lan10g0656 1169 MobiDBLite consensus disorder prediction 740 792 - -
Lan10g0656 1169 MobiDBLite consensus disorder prediction 236 259 - -
Lan10g0656 1169 MobiDBLite consensus disorder prediction 224 259 - -
Lan10g0656 1169 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1167 - -
Lan10g0656 1169 Gene3D Transferase(Phosphotransferase) domain 1 912 1160 - -
Lan10g0656 1169 MobiDBLite consensus disorder prediction 778 792 - -
Lan10g0656 1169 MobiDBLite consensus disorder prediction 752 773 - -
Lan10g0656 1169 ProSitePatterns Serine/Threonine protein kinases active-site signature. 984 996 IPR008271 GO:0004672|GO:0006468
Lan10g0656 1169 CDD PKc_DYRK_like 858 1160 - -
Lan10g0656 1169 ProSiteProfiles Protein kinase domain profile. 858 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0656 1169 Pfam Protein kinase domain 858 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0656 1169 PANTHER - 2 1167 - -
Lan10g0656 1169 MobiDBLite consensus disorder prediction 662 685 - -
Lan10g0656 1169 MobiDBLite consensus disorder prediction 144 170 - -
Lan10g0656 1169 SMART serkin_6 858 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0656 1169 SUPERFAMILY Protein kinase-like (PK-like) 848 1162 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0656 Lan-Chr10 6252920 6263716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0656 857 1155 MAP Kinase Gene Family AT5G19010 30.408 8.77e-29 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lan10g0656 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0656 - - lang:109331412 1939.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0845 17 10491915 10502422 Lan10g0656 10 6252920 6263716 PCT
Lan10g0656 10 6252920 6263716 Lan17g0845 17 10491915 10502422 PCT