Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0654 ATGGATGGAGATAATGGTCTTAACATGCGTAATTGGGGTTACTATGAAGCTACAACACCATTTAAGAACCACCTTGGACTACAGCTCATGTCCTCCATGCCTGAAAAACAACCTTTGCTCGGAGCACGCAATGCTGCTGCTGCTCCGTTCCACCGCAGGGACACTGGGATGCTCCAACCAGCGTACCCGATGGAGTACATGAGAGATGCTTGGATTGGTCATAATCATAGAGACAAGTTTATGAATATCAATATGATACCTACAAACAACAATTACTCTGTTGTTCCTGAGACGTCATCAGCTCATCAAATGCAAATGGTTGATGTGCAATCACAACCAGCTGACCAGTCAGAGGAAGAAACACCGGTCGAAGAGGAGCCACCTGTTGAGATGGTCAATGGAACTGGTAAGAAAAGGGGTAAGGGGGCCAAGGTTCCCAAGGCTTCAAAGGCAAAGAAGCCCAAGAGAGGACCTCGTGAGCCAAAGGATGAGAATACTACTTCGGTTCAACGAGCAAGGACTATAAAGAGAAGTGCTGAGATTGTAATAAACGGGATTGATATGGATCTTTCGAGCATTCCTATACCTGTTTGTTCATGCACTGGGGCACCTCAGCAGTGTTATCGATGGGGCTCTGGTGGGTGGCAGTCTGCATGTTGCACAACAGGCATATCAATCTATCCCTTGCCTATGAGTACCAAGCGTCGTGGGGCGAGGATAGCTGGAAGAAAAATGAGTATAGGAGCGTTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAAGGTTATAACTTCTCGAATCCAATTGATTTGAAAAATTATTGGGCAAAACATGGTACCAACAAGTTTGTCACTATCAGGTAG 861 0.4541 MDGDNGLNMRNWGYYEATTPFKNHLGLQLMSSMPEKQPLLGARNAAAAPFHRRDTGMLQPAYPMEYMRDAWIGHNHRDKFMNINMIPTNNNYSVVPETSSAHQMQMVDVQSQPADQSEEETPVEEEPPVEMVNGTGKKRGKGAKVPKASKAKKPKRGPREPKDENTTSVQRARTIKRSAEIVINGIDMDLSSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGISIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKNYWAKHGTNKFVTIR* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0654 286 MobiDBLite consensus disorder prediction 98 173 - -
Lan10g0654 286 PANTHER - 1 286 IPR010409 -
Lan10g0654 286 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 286 - -
Lan10g0654 286 MobiDBLite consensus disorder prediction 140 155 - -
Lan10g0654 286 MobiDBLite consensus disorder prediction 98 117 - -
Lan10g0654 286 MobiDBLite consensus disorder prediction 156 170 - -
Lan10g0654 286 SMART GAGA_bind_2 1 286 IPR010409 -
Lan10g0654 286 Pfam GAGA binding protein-like family 1 286 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0654 Lan-Chr10 6208281 6209892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0654 1 286 BBR or BPC Transcription factor family AT2G01930 49.000 4.53e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lan10g0654 GAGA_bind 3.1e-105 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0654 - - gmx:606296 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0654 10 6208281 6209892 Lan3g0383 3 2857098 2858803 LSH