Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0638 ATGGGTTTTAATGATATCTCTAACACAGGGCTTCAATTTGGTCTTGGTCTTAGTCTTGGCCTCCATGATCATCACAATCAAAGAGATCAAATCCAGAAAAAAAGAGAAGATGATCCATCAAAATTTAACAAGGCATATTATCTATCTCTAACATTAGGACCAAGTAGTGATGATCATGGTAATGAGACAAATAACCAACCAGGTTCAAAGATTGAAGCTTCTTCGCGTAGCACGGTGTCTTCATCATTGATTTCCAATTCTTCAAGTATCACGAGGGTGAGAGACCATTGTTTAGGTCAAGAATTTGAGGTTGAGGTAGAGAAGGTTCCATCAAAGGTACGCAATTTTGATGGTGAAGATATTACCCCAAAGAAGAAACTTAGGCTCACAAAAGAACAATCAACAGTGTTAGAGAAAAACTTCGAAGAACATTCTACTCTCAATCCGAAGCAAAAGCAAGAGATTGCAAGAAAGCTGAATTTGAGGGCGAGACAAGTAGAAGTGTGGTTTCAAAATAGAAGAGCCAGGATAAAACTGAAGCAAACAGAATCTGATTTCGAGTCGCTAAGTAAGTACTGCAAGACTCTAAGAGAGGAGAACAAGAGGCTGCAAAAGGAGCTGGAAGAACTTAAATCAATGCTAACATCACCAGGACCCTTCCATGCGCAAATTCCAGCAACCACCCTTACCAAATGCCCTTCTTGTGAGAGAATTTGCGGTGGTGAAAGCAATGGCTCCTCGCCCCCAACAACTTTGCTTATTGGCTCAAAGGCCCATAATCACTTCTATACAGATAAATATCCATTTAGCCACTCATCATCAGCATCATGCTAG 834 0.4041 MGFNDISNTGLQFGLGLSLGLHDHHNQRDQIQKKREDDPSKFNKAYYLSLTLGPSSDDHGNETNNQPGSKIEASSRSTVSSSLISNSSSITRVRDHCLGQEFEVEVEKVPSKVRNFDGEDITPKKKLRLTKEQSTVLEKNFEEHSTLNPKQKQEIARKLNLRARQVEVWFQNRRARIKLKQTESDFESLSKYCKTLREENKRLQKELEELKSMLTSPGPFHAQIPATTLTKCPSCERICGGESNGSSPPTTLLIGSKAHNHFYTDKYPFSHSSSASC* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0638 277 CDD homeodomain 123 181 IPR001356 GO:0003677
Lan10g0638 277 MobiDBLite consensus disorder prediction 52 85 - -
Lan10g0638 277 Gene3D - 130 177 - -
Lan10g0638 277 PANTHER - 7 275 - -
Lan10g0638 277 SMART halz 180 223 IPR003106 GO:0006355|GO:0043565
Lan10g0638 277 Coils Coil 179 216 - -
Lan10g0638 277 MobiDBLite consensus disorder prediction 54 85 - -
Lan10g0638 277 Pfam Homeodomain 124 178 IPR001356 GO:0003677
Lan10g0638 277 ProSitePatterns 'Homeobox' domain signature. 155 178 IPR017970 GO:0000981|GO:0006355
Lan10g0638 277 ProSiteProfiles 'Homeobox' domain profile. 120 180 IPR001356 GO:0003677
Lan10g0638 277 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 7 275 - -
Lan10g0638 277 SUPERFAMILY Homeodomain-like 122 188 IPR009057 -
Lan10g0638 277 SMART HOX_1 122 184 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0638 Lan-Chr10 5921555 5924461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0638 1 238 Homeobox Transcription Factor Family AT4G37790 46.721 2.71e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan10g0638 Homeodomain 4.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0638 K09338 - gmx:100797650 290.812