Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0637 ATGGGCAGAGCACCTTGCTGCGACAAAGCAAACGTGAAGAAAGGGCCTTGGTCCCCAGAAGAAGATGCTAAGCTCAAGTCCTACATCCAAAAACATGGCACCGGAGGTAACTGGATTGCTTTGCCACAAAAAATAGGTCTGAAGCGTTGTGGCAAGAGTTGCCGTCTAAGGTGGCTAAACTATCTTCGCCCTAATCTCAAGCATGGTGGTTTCTCTGAAGAAGAAGACAACATTATTTGCAGCCTTTACATTAGTATTGGAAGCAGGTGGTCGGTGATTGCAGCTCAATTGCCAGGAAGAACTGATAATGACATAAAAAATTATTGGAACACTAGGCTGAAGAAGAAACTTCTAGGTAAGCACAGCAAAGAACAACAACAAGCACATAGTAATAGAGGTAACAATGGTGTTGTTAAGCAAGAAAGCAATAGAGTGAGTGGTAGTGAGTCCTTTTCCTTTGTTCAAGAAAATAGTACTCATGAATATAATTGGCAACAGATGCCTATGCTACCTCTACAACCATTGACATACACTAACCAAAGCCCATGTTTCAACGACCAACATTCTATTAAAAAATTGCTTATTAATCTTGGAGGGAGATTTTCTGATGATAACTATTATCCTCCCCTTGATGGGTTGTTGAATCATCAATTCTCAAATGGCATTTATCAAGAACAAGTTCATGTGGTTTCTTCTTCTTCTGCTTGCATTAGCAATAACAATATCAACAAGAGTGAAGTACAATGTGCACATAATAATTATCAAGGACGAGGAAGTACTTTCACATCACCAAATGAGGAAATGGTATCTACTACTAATTATCCACAAAGGTTAGATGGGTTGGAGTTTTTCTATGAGGAGGACATGGTCAACTATAAGATAATAGGTTCTTCTAGAACTTGTAGCCAAAGTAGTAATTGGGCTGAGACTAATACTCGGATTTATCATCATCCTCTCATTGCTTCAAATTACCAAATTCAAGGCTTGAGCCAAGAGACTCAACAAGAGTGTGTTTTGCAAGAGTTTAGCTACCCCGTAGTACAATAG 1047 0.3935 MGRAPCCDKANVKKGPWSPEEDAKLKSYIQKHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHSKEQQQAHSNRGNNGVVKQESNRVSGSESFSFVQENSTHEYNWQQMPMLPLQPLTYTNQSPCFNDQHSIKKLLINLGGRFSDDNYYPPLDGLLNHQFSNGIYQEQVHVVSSSSACISNNNINKSEVQCAHNNYQGRGSTFTSPNEEMVSTTNYPQRLDGLEFFYEEDMVNYKIIGSSRTCSQSSNWAETNTRIYHHPLIASNYQIQGLSQETQQECVLQEFSYPVVQ* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0637 348 CDD SANT 71 113 IPR001005 -
Lan10g0637 348 SMART sant 13 64 IPR001005 -
Lan10g0637 348 SMART sant 67 115 IPR001005 -
Lan10g0637 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lan10g0637 348 Gene3D - 7 68 - -
Lan10g0637 348 CDD SANT 16 62 IPR001005 -
Lan10g0637 348 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lan10g0637 348 PANTHER OS09G0431300 PROTEIN 1 326 - -
Lan10g0637 348 MobiDBLite consensus disorder prediction 128 143 - -
Lan10g0637 348 MobiDBLite consensus disorder prediction 119 143 - -
Lan10g0637 348 Gene3D - 70 142 - -
Lan10g0637 348 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lan10g0637 348 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lan10g0637 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lan10g0637 348 PANTHER TRANSCRIPTION FACTOR MYB36-LIKE 1 326 - -
Lan10g0637 348 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lan10g0637 348 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0637 Lan-Chr10 5752372 5753893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0637 1 195 MYB Transcription Factor Family AT3G49690 64.851 1.37e-86 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan10g0637 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0637 K09422 - gmx:100800290 446.047