Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0631 ATGGATTTTCAACATGGTAATGAGAGGATTCTGAAATGTCCTCCATCATCTGGTTTAAGCACAAATGTTTCAGAAATGGCTATTAGTTCTGTGTCTATGGCTAAGCCTAATCTTCCTTCAGATCATGTAACTAATAACCCTTTTCTTGCTTCTTCTGCTTGGGATCCACTTGTTTCACTGAGTCAGGCACAAACTTTTGGAGGCTCTTCAATGGTTTCTCATAGTGACTTTGGCAACAACTCATCTTACCCTCCTCTTGTTTTGGAAAACCAGGGAATGAGCAGCACCTCTCACCTTGTTCAATATATGTCTGACTCAAATCTTGGAGACATGGTTCACAAGGTTCCTTCCTATGGTAGTGGAAACTTCTCAGAAATTGTTGGCACTTTTGGTCAACCTGGGTTTGGTGACATAGCTAACACTAATTCTGGGTATAGATCCAATTATAATGTGAGTAAGGATGCTGGAACTGAAAGGGCTCCGATAAATGGTGAACAATCTCAAGTTGAGGATTCAGCTACTGAAGAAGGAACACCAGGATCTGGTCCTAGTGGGAATAGAAGAAAGAGAAGTCTTGATCATAATTCTTCTTTCAGTCCAAATAAGAATGCTGAGGTTGATGCACTGAAAATTTCTCCTGGGAAGAGCTCTGAGAGTGCAAAAGAACATGAAAAGAAACAAAAAGTTGAGCAGAATAATAGTGCAGATTTGCGCGGTAAGCAACCGGTGAAGCAGGCTAACGAGAATTCCCAAAGTGGAGAAGCTCCTAAAGACACTTTCATTCATGTGAGAGCTCGACGAGGTCAAGCCACAAATAGCCATAGCCTTGCAGAAAGGGTGAGAAGAGAAAAGATTAGCGAGCGAATGAGGTTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACCGGCAAAGCAGTTATGCTGGACGAGATTATAAACTACGTGCAATCACTGCAGAAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACAGTCAACCCAGAACTGACTTTTGATATGGAGAGGATCCTATCCAAAGATATTCTTCAGTCGCGCATAGGACATGGAATTGGTGGATACGGTCCTGGTATAAGCTCCTCTCACCCATTTCCCAATGAAAGTTTCCAAGGAACTATGACTGGCATGCCTAGTACATCAACACAATTCCCTCCTTTGCCTCAGACTGTTTTGGATCACGAGTTCCAAAGCTTCTATGGAATGGGATATGATTCCAGTACAGCACTCGAAAATTTGGGACCAAATGGGCGGTTGAAAACGGAGTTATAG 1290 0.4248 MDFQHGNERILKCPPSSGLSTNVSEMAISSVSMAKPNLPSDHVTNNPFLASSAWDPLVSLSQAQTFGGSSMVSHSDFGNNSSYPPLVLENQGMSSTSHLVQYMSDSNLGDMVHKVPSYGSGNFSEIVGTFGQPGFGDIANTNSGYRSNYNVSKDAGTERAPINGEQSQVEDSATEEGTPGSGPSGNRRKRSLDHNSSFSPNKNAEVDALKISPGKSSESAKEHEKKQKVEQNNSADLRGKQPVKQANENSQSGEAPKDTFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQKQVEFLSMKLATVNPELTFDMERILSKDILQSRIGHGIGGYGPGISSSHPFPNESFQGTMTGMPSTSTQFPPLPQTVLDHEFQSFYGMGYDSSTALENLGPNGRLKTEL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0631 429 MobiDBLite consensus disorder prediction 161 185 - -
Lan10g0631 429 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 269 319 IPR011598 GO:0046983
Lan10g0631 429 CDD bHLH_AtBPE_like 260 344 - -
Lan10g0631 429 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 7 429 IPR024097 GO:0006355
Lan10g0631 429 Gene3D - 266 340 IPR036638 GO:0046983
Lan10g0631 429 Pfam Helix-loop-helix DNA-binding domain 272 320 IPR011598 GO:0046983
Lan10g0631 429 MobiDBLite consensus disorder prediction 149 257 - -
Lan10g0631 429 SMART finulus 275 325 IPR011598 GO:0046983
Lan10g0631 429 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 7 429 - -
Lan10g0631 429 MobiDBLite consensus disorder prediction 216 233 - -
Lan10g0631 429 MobiDBLite consensus disorder prediction 234 256 - -
Lan10g0631 429 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 337 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0631 Lan-Chr10 5661430 5665376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0631 1 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 40.046 4.24e-80 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan10g0631 HLH 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0631 - - gmx:100794464 620.157