Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0628 ATGAGAATTACATTACCCTTCTCTATCCGCAAATCTCGTCGAACCAACACCAAAACCATTCCTCTATATCCATCTCTCTCAAAACACAACAACGACGTCGTTCAACACGGCTTCGATGGCTCATCTTTCATCGGCGCCGTTTTCAACCTTTCCACCACCATCGTCGGTGCCGGAATCATGGCTCTTCCCTCCGCCGTCAAACAATTGGGACTCATCCCTGGTTTAGGGATGATTATTCTTGGAGCAATGTTAACCGAAGCTTCAATTGATATTCTGTTGAAGTTCACACGTGTGTCGAAATCTACAACGTATTCTGGTGTTGTTTGTGATTCGTTTGGTGAAGTTGGACGGATCCTTTTGCTTCTTTGCATTATCGTCAGTAATATTGGAATGCTTGTTGTTTACATGATCATTATCGGGGATGTGTTCTCAGGAACTTGGTCAGAAGGAGTACACTATTCTGGAGTTCTGGAAGAATGGTTTGGTCAACATTGGTGGTCAACACGTCCAGTCTTACTGCTGCTCACGATGCTTCTAGTCTTCTTGCCTCTTGCATCATTTAGGCGTGTTGATTCACTGAGATACACATCAGCATTGTCCGTGGGGTTGGCTGTTGTTTTTGTGGTGATAACAGCAGGAGTAGCAACTTATAAGTTTATTGATGGAAGCATTGGGATGCCACGCTTAATGCCAAAATTCACTGGCCAGGAATCCTTTTGGAAGCTCTTCACAACTATCCCTATATTAGTCACAGCTTACATCTGTCATCATAACGTTCATCCTATAGATAATGAACTTAAAGACCCTACCCATATGAAGTCAATAGTCCGGACATCACTCTTGTTATGCGCATCTGTGTATGTAGCAACCAGTCTTTTTGGATTTTTCTTATTTGGGGACAAAACACAGGATGATGTACTTGCCAACTTTGATGGTGATCTTGGAATTCCTTATGGTTCATTTCTTAATGATGTAGTTAGAATGAGCTATGGTGCTCACCTTATCCTTGTGTTCCCAATTGTGTTTTACTCCCTTCGCCTTAACGTAGATGGCCTTCTGTTTCCACATGCTATTCCTCTTGCCTTTGACAACCAGAGATTCTATTTGGTGACCATAGTTCTCTTGGTTTTCATTTTTCTTGGAGCCAATTTTGTTCCCAGCATCTGGGATGCCTTCCAGTTTACAGGTGCCACAGCTTCTGTCTCTGCTGCATTCATTTTTCCTGCTGCCATTGCTATTAGGGACACACGTGGGTTTGCAACAAAGAAAGACAAACGGTTATCTTGGTTGATGATACTTTTAGCCATCTCATCTAGCACTGTAGCCATCTCTAGTGACTTGTATAGCATCTTCAGTAGTGAAGCAGGAGCAACAGCTAGAACCTGA 1386 0.4286 MRITLPFSIRKSRRTNTKTIPLYPSLSKHNNDVVQHGFDGSSFIGAVFNLSTTIVGAGIMALPSAVKQLGLIPGLGMIILGAMLTEASIDILLKFTRVSKSTTYSGVVCDSFGEVGRILLLLCIIVSNIGMLVVYMIIIGDVFSGTWSEGVHYSGVLEEWFGQHWWSTRPVLLLLTMLLVFLPLASFRRVDSLRYTSALSVGLAVVFVVITAGVATYKFIDGSIGMPRLMPKFTGQESFWKLFTTIPILVTAYICHHNVHPIDNELKDPTHMKSIVRTSLLLCASVYVATSLFGFFLFGDKTQDDVLANFDGDLGIPYGSFLNDVVRMSYGAHLILVFPIVFYSLRLNVDGLLFPHAIPLAFDNQRFYLVTIVLLVFIFLGANFVPSIWDAFQFTGATASVSAAFIFPAAIAIRDTRGFATKKDKRLSWLMILLAISSSTVAISSDLYSIFSSEAGATART* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0628 461 PANTHER AMINO ACID TRANSPORTER AVT6A 11 455 - -
Lan10g0628 461 Pfam Transmembrane amino acid transporter protein 40 436 IPR013057 -
Lan10g0628 461 PANTHER AMINO ACID TRANSPORTER 11 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0628 Lan-Chr10 5609620 5620815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0628 10 455 Amino Acid or Auxin Permease AAAP Family AT3G30390 57.143 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0628 K14207 - gmx:100814034 667.922