Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0626 ATGAAAATGGAGCCACCCCATCATCATCATAATCATCATGAACATGATGATGGTCAAGTTCAAGATCATAATCTATATTATCATCACTCTCAACAAGGTTCTGCTGTTTCTAACAGTACTGTTCCCACAAGCTTCTATTGGGAAAACAGTGCTTTTCATTCTCTTCCTTTGTCTATGATGCCTCTCAAATCTGATGGTTCACTTTGCATTATAGAAGCACTCAACAAATCACAAACACAAGTGATGATGCCAAGTTCATCTCCAAAACTTGAAGACTTCCTTGGTGGTGCAACTATGGGAAGTGACCAATATGGAGATTCTGAAAGAGAAGCAATGGCTCTAAGTTTAGACAGCATCTACTATAACCAAAATGCTCATGAGTCTCAAACAAGTAGAGACTTTCTTTCTGACCCTTTCAGGCAACATCCATATTATTCAGGCCTTGCTTGCAATAGTATTTACCAAACACCATTGGATGAAGAACAAGAAACCAAACAACCCCATGTCACAGTTTGCAGCAGCTCACAAATGCCTCAAGTGGGAGATGAAGGAACTGCTTGCTTCAAAAACTGGGAGCAGCAAGTGAATAATAGTACTACTAGCATTGGAGATGGTGTTATTGCTTCAGGTTCACCTTCAGGGTCTGTTGGTGTTGTTGGCAGAGTTAGTAGTGCACAACATTGTGGAAATTTGCAGTCTTTAAGCCTTTCCATGAGTCATGTTTCTCAGTCAAACTGTGTCACTGTTCCTTCTGGTACTACTCCTACTGAATCAGTGGTCATGGAAACCAAAAAGAGAGGGTCTTCTAAGCTTGGACAGAAGCATACTGTGCATAGGAAATCCATTGATACATTTGGGCAGAGAACTTCACAGTATAGAGGTGTCACGAGGCATAGATGGACTGGTAGATATGAAGCACATTTGTGGGATAATAGTTGCAAGAAAGAAGGGCAAACAAGGAAAGGAAGACAAGTTTATTTAGGTGGATATGATATGGAAGAGAAAGCTGCAAGAGCATATGATCTTGCAGCTCTTAAGTATTGGGGATCTTCGACACATATAAACTTCCCGCTACAAAATTACCAAATGCAACTTGAAGAAATGAAAAACATGAGCAGGCAGGAATTCGTTGCTCACTTGAGAAGAAAGAGCAGTGGATTTTCAAGGGGTGCTTCAATATACAGAGGGGTGACAAGGCACCACCAACATGGAAGATGGCAAGCAAGAATAGGTAGAGTTGCAGGAAATAAGGACCTTTATCTTGGGACATTCAGTACACAAGAGGAAGCAGCTGAAGCATATGATGTAGCAGCAATCAAATTTCGCGGCGTAAACGCCGTGACTAACTTTGACATATCTAGATACCATGTTGAAAATATCATGGCCAGTAATACCCTACTTACTGGAGAGCAAGCAAGGAGAAACAACAAAGATAGTGAACCAAGAACTGAGACAATTAAGTATAATGTTGTATCAAGCCAGATCAGTAACAAAGAAGAACTTGAAGCTGCAAACAACAACAATGAAACCAATGGTTCAGATTGGAATATGGTATTGTATCATCAATCACCACAACAGCAACAACAAAAACAATGA 1596 0.4035 MKMEPPHHHHNHHEHDDGQVQDHNLYYHHSQQGSAVSNSTVPTSFYWENSAFHSLPLSMMPLKSDGSLCIIEALNKSQTQVMMPSSSPKLEDFLGGATMGSDQYGDSEREAMALSLDSIYYNQNAHESQTSRDFLSDPFRQHPYYSGLACNSIYQTPLDEEQETKQPHVTVCSSSQMPQVGDEGTACFKNWEQQVNNSTTSIGDGVIASGSPSGSVGVVGRVSSAQHCGNLQSLSLSMSHVSQSNCVTVPSGTTPTESVVMETKKRGSSKLGQKHTVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGSSTHINFPLQNYQMQLEEMKNMSRQEFVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYHVENIMASNTLLTGEQARRNNKDSEPRTETIKYNVVSSQISNKEELEAANNNNETNGSDWNMVLYHQSPQQQQQKQ* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0626 531 CDD AP2 290 357 IPR001471 GO:0003700|GO:0006355
Lan10g0626 531 SUPERFAMILY DNA-binding domain 290 358 IPR016177 GO:0003677
Lan10g0626 531 SUPERFAMILY DNA-binding domain 392 453 IPR016177 GO:0003677
Lan10g0626 531 Gene3D AP2/ERF domain 290 359 IPR036955 GO:0003700|GO:0006355
Lan10g0626 531 Gene3D AP2/ERF domain 393 453 IPR036955 GO:0003700|GO:0006355
Lan10g0626 531 ProSiteProfiles AP2/ERF domain profile. 291 357 IPR001471 GO:0003700|GO:0006355
Lan10g0626 531 CDD AP2 392 453 IPR001471 GO:0003700|GO:0006355
Lan10g0626 531 Pfam AP2 domain 291 349 IPR001471 GO:0003700|GO:0006355
Lan10g0626 531 Pfam AP2 domain 393 443 IPR001471 GO:0003700|GO:0006355
Lan10g0626 531 ProSiteProfiles AP2/ERF domain profile. 393 451 IPR001471 GO:0003700|GO:0006355
Lan10g0626 531 PRINTS Ethylene responsive element binding protein signature 292 303 IPR001471 GO:0003700|GO:0006355
Lan10g0626 531 PRINTS Ethylene responsive element binding protein signature 433 453 IPR001471 GO:0003700|GO:0006355
Lan10g0626 531 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 20 530 - -
Lan10g0626 531 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 20 530 - -
Lan10g0626 531 MobiDBLite consensus disorder prediction 496 515 - -
Lan10g0626 531 SMART rav1_2 393 457 IPR001471 GO:0003700|GO:0006355
Lan10g0626 531 SMART rav1_2 291 363 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0626 Lan-Chr10 5591233 5594352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0626 57 499 AP2-EREBP Transcription Factor Family AT4G37750 54.641 4.61e-152 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lan10g0626 AP2 2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0626 K09285 - gmx:100798179 679.093