Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0608 ATGTTGTCTCTCAAATTATTATGGTGGTTTCTGTTTTTGTGTGGATGCCTCTCATGCAAGGCCAACCAACAAAGTGAATACCTCTATAAGTTGATTCAGTCAAAGAGATCTCAGAAATCTTTGCATAAAGAAGCTTCAATTTCAACTTTTACAAATGGTTCTAATGGTGTAGATAGATATTTTTCAAAGGTATATGTTGAGGTTGAGAATCAATCTGGGCTCAAAGAAGCTGATAAAGTGAAGGGTTTGCCAGGACAACCCCAACAAGGGGTGGATTTTGATCAATATGCTGGCTATGTAACAGTTGATGCAAAGGCAGGGAGAGCATTATTCTATTACTTTGTGGAGTCACCTTTCAATTCTTCAACAAAACCTCTTGTTCTATGGCTAAATGGAGGGCCTGGGTGTTCTTCCCTTGGATATGGAGCAATGGAGGAACTGGGACCTTTTAGAGTTAACAGTGATGGAAGAACACTTTTCAGAAATGAATATGCTTGGAATAACGTGGCAAACGTTCTTTTCCTGGAGTCTCCAGCAGGAGTTGGGTTTTCATATTCAAACACTTCTTCAGATTATTCTGAAACTGGTGACAATAGCACAGCCATTGATTCTTACACTTTTCTTCTAAACTGGCTTGAGAGGTTTCCACAGTATAAAAGTAGAGACTTTTTCATAACTGGAGAAAGCTATGCTGGCCATTATGTTCCTCAGCTGGCTGACATTATTCTCTCAAATAATAAGCTATTAACAAATCATACAGCGATCAATCTGAAAGGAATTGCGATTGGGAATGGGTGGATAGATGATAATACATGTTCAAAGGGAATGTATCATTATTTCTGGACACATGCTCTGAACTCTGATGAAACCTATGAAGGAATTGGAAAACACTGTGACTTTGATAATGGTAACTTTTCAAGTGAGTGTTACAAATATCAAAGTATATCTGATGATGAAATTGGAGATCTTGACATATACAACGTATATGCTCCACCATGCAATTCAGCTGCAACAAAAACTGCTACCTACTCTGGCAGTGACTTCGACCCTTGTTCTGATGATTATACCAATTCATACTTAAACCTCCCAGAAGTTCAAAAGGCTCTTCATGTTAAACCCACAAAATGGTTTCCTTGCAGTGCGGTGGGATGGGCAGATAGTCCTGCAAGTCTTCTACCAACTATAAATCGTATTGTATCAAAGGGTATAAGCACCTTGATTTATAGTGGTGATACAGATGGGCGTGTTCCTATAACATCAGCTAGGTACTCAGTAAATGCCTTGAAACTTCCAATTGAGACACCATGGCGTCCATGGTACTCTTCCAATGAGGTTGGAGGATATGTGGTTGGGTACAAAGGGCTCACACTAGTAACTGTAAGAGGAGCTGGACACATGGTTCCAAGCTACCAACCACAAAGAGCACTAACCATGATCTCATCTTTCCTCAGTGGAAAACTTCCTCCCAAGAATTAA 1476 0.397 MLSLKLLWWFLFLCGCLSCKANQQSEYLYKLIQSKRSQKSLHKEASISTFTNGSNGVDRYFSKVYVEVENQSGLKEADKVKGLPGQPQQGVDFDQYAGYVTVDAKAGRALFYYFVESPFNSSTKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGRTLFRNEYAWNNVANVLFLESPAGVGFSYSNTSSDYSETGDNSTAIDSYTFLLNWLERFPQYKSRDFFITGESYAGHYVPQLADIILSNNKLLTNHTAINLKGIAIGNGWIDDNTCSKGMYHYFWTHALNSDETYEGIGKHCDFDNGNFSSECYKYQSISDDEIGDLDIYNVYAPPCNSAATKTATYSGSDFDPCSDDYTNSYLNLPEVQKALHVKPTKWFPCSAVGWADSPASLLPTINRIVSKGISTLIYSGDTDGRVPITSARYSVNALKLPIETPWRPWYSSNEVGGYVVGYKGLTLVTVRGAGHMVPSYQPQRALTMISSFLSGKLPPKN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0608 491 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Lan10g0608 491 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Lan10g0608 491 Gene3D - 351 382 - -
Lan10g0608 491 PANTHER CARBOXYPEPTIDASE 22 487 - -
Lan10g0608 491 ProSitePatterns Serine carboxypeptidases, serine active site. 225 232 IPR018202 GO:0004185
Lan10g0608 491 Gene3D alpha/beta hydrolase 74 335 IPR029058 -
Lan10g0608 491 SUPERFAMILY alpha/beta-Hydrolases 81 486 IPR029058 -
Lan10g0608 491 Gene3D - 391 485 - -
Lan10g0608 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Lan10g0608 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Lan10g0608 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 211 236 IPR001563 GO:0004185|GO:0006508
Lan10g0608 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Lan10g0608 491 Pfam Serine carboxypeptidase 84 485 IPR001563 GO:0004185|GO:0006508
Lan10g0608 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 487 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0608 Lan-Chr10 5413389 5419066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0608 359 486 Calmodulin-binding Proteins AT2G22960 31.579 4.84e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0608 K16297 - gmx:100818983 783.097