LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan10g0600	ATGGCATCATCAACTCTTTCTTCCTCTTTTCTTCAATTAGAATTCCCATCAACAAAAAAACCATCTTCCAACATAAACCGTCTTTCATTCATTCCCTCACAAATCAAAGTCAAAGCTTCTGTTTCTGAGAAACCATTTCCACCAATTTCAGAACCAAAACAACTCACTAAACTTCCCTTCAGAAAAATCCCTGGAGATTACGGAATCCCAATTATTACTCCGTTCCAGAATCGTCTCGATTATTTCTACAACCAAGGCCGCGATGAATACTTCAAATCCAGAATCCGAAAATACAAGTCAACGGTTTTTCGCACCAACGTGCCACCTGGCCCTCCAATCGCTTCGAACCCAAACGTCGTCGTTTTACTCGACTCCAAATCCTTCCCCATTCTCTTCGACGTTACAAAAGTTGAAAAAAGAGATGTGTTCACCGGAACTTTTATGCCTTCAACCGATTTAACCGGTGGCTATAGGGTCCTCTCTTACCTTGATCCCTCCGAACCCAAACACGGCCTCCTTAAACGACTCATCTTCTTTCAATTGAAATCACGTCGTGAACACGTGATCCCAGAGTTTAGGTCTAGTTATGATGAACTTTTTCAGACTTTGGAAAATGAGCTGGCATCTAAAGGGAAATCTAGTTTTAATGATGCTAATGATCAAGCTGGGTTTAACTTTTTAGCTCGCTCACTTTTCGGTTCAAATCCTGGAGACAGCTCTCTCGGACGCGATGGTCCTAGCATAGTTCAAAAATGGGTTTTGTTTCAGCTCAGTCCGATTTTAAAACTAGGCCTTCCTCAGTTTCTAGAAGATACTATAATCCACACTTTTCGTCTCCCTCCAAGTTTGATTAAGAAAGACTATCAGAGGCTCTACGATTTTTTCTACCAATCTTCAGGTTTCGTTCTTGATGAAGCGGAGCGGTTAGGGATTTCACGAGAAGAAGCTTGTCACAATCTTTTGTTCGCTACTTGTTTCAACTCTTTTGGTGGAATGAAGTTGTTTTTCCCAAACTTGATGAAATGGATCGGGAGAGGAGGTATGAAACTTCACACACAGCTTGCCATGGAGATTAGAACTGCCGTGAGATCCGCCGGAGGGGTGGTTACAATGGCGGCGATGGAGAACATGCCGCTGATGAAATCGGTGGTTTACGAAGCGTTCAGAATTGATCCTCCAGTGCCGTTGCAGTTTGGAAAAGCGAAGAGGAATTTGGTTATAGAGAGTCATGAACATGCTTATGAAGTAAAAGAAGGGGAAATGCTATTTGGGTATCAACCTTTTGCGACGAAGGATCCTAAGGTTTTTGATAGGGCTGAGGAATTTGTTGGGGACAGGTTCGTTGGAGAAGGAGAGAAGTTGTTGAAACATGTGGTTTGGTCGAATGGACCTGAGACAGAGAATTCTAGTGTTGGGAACAAGCAATGTGCAGGGAAGGATTTTGTGATGTTGTTTTCGAGGCTCTTAGTGGTTGAGTTGTTTATGCGTTATGATTCTTTTGAGATTCAAGTTGGAACTACTCCATTAGGTCCTTCCATTACTATCACATCTCTAAAGAGATCAAGCTTTTAG	1572	0.423	MASSTLSSSFLQLEFPSTKKPSSNINRLSFIPSQIKVKASVSEKPFPPISEPKQLTKLPFRKIPGDYGIPIITPFQNRLDYFYNQGRDEYFKSRIRKYKSTVFRTNVPPGPPIASNPNVVVLLDSKSFPILFDVTKVEKRDVFTGTFMPSTDLTGGYRVLSYLDPSEPKHGLLKRLIFFQLKSRREHVIPEFRSSYDELFQTLENELASKGKSSFNDANDQAGFNFLARSLFGSNPGDSSLGRDGPSIVQKWVLFQLSPILKLGLPQFLEDTIIHTFRLPPSLIKKDYQRLYDFFYQSSGFVLDEAERLGISREEACHNLLFATCFNSFGGMKLFFPNLMKWIGRGGMKLHTQLAMEIRTAVRSAGGVVTMAAMENMPLMKSVVYEAFRIDPPVPLQFGKAKRNLVIESHEHAYEVKEGEMLFGYQPFATKDPKVFDRAEEFVGDRFVGEGEKLLKHVVWSNGPETENSSVGNKQCAGKDFVMLFSRLLVVELFMRYDSFEIQVGTTPLGPSITITSLKRSSF*	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan10g0600	523	PRINTS	E-class P450 group IV signature	377	393	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lan10g0600	523	PRINTS	E-class P450 group IV signature	430	448	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lan10g0600	523	PRINTS	E-class P450 group IV signature	476	494	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lan10g0600	523	PANTHER	CYTOCHROME P450 26	41	509	-	-
	Lan10g0600	523	Gene3D	Cytochrome P450	54	523	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lan10g0600	523	PANTHER	ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE	41	509	-	-
	Lan10g0600	523	SUPERFAMILY	Cytochrome P450	57	509	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lan10g0600	523	Pfam	Cytochrome P450	353	498	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan10g0600	Lan-Chr10	5260046	5261940	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan10g0600	37	523	Cytochrome P450	AT5G42650	62.090	0.0	645

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan10g0600	K01723		-	gmx:100037481	804.668

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan10g0600	10	5260046	5261940	Lan3g0510	3	4834297	4847214	LSH