Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0577 ATGTTTCATCTTTGGACCAATTCACAACAAGACCAAGAAAGCAAAGAGCTTTATGCTGAATCCAAGATTAAGGAGCTGAAGGGTGCAATTGGACCCTTATCTGGACATAGCTTGAAGTATTGTACTGATGATTGTTTGAGAAGATATCTTGAAGCTAGAAACTGGAATGTAGACAAGTCCAAGAAGATGTTGGAAGATACACTCAAGTGGAGATCAAACTATAAGCCTGAACAAATCCGTTGGGATGAGGTTGCAATGGAAGGGGAGACAGGCAAATTGTACAGAGCAAATTTTCATGATAGACAAGGAAGGACTGTCCTTATTTTGAGACCTGGAATGCAGAACACTTCCTCAATGGAGAATCAGATGCGTCATCTAGTGTACCTTTTGGAAAATGCTATGCTGAACCTTTCACAAGGTCAAGAACAAATGGCATGGTTAATAGACTTCACAGGTTGGTCAATAACCAACACTCCAATTAAATCAGCCAGAGAAACCATTAACATTCTGCAGAACCACTATCCTGAGAGGCTTGGCATTGCATTTCTTTACAATCCACCTCGTGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTAGATAACAAGACATTTCAGAAGGTGAAGTTTGTGTACCCGAAAAATAAAGATAGTGTGGAGCTCATGAAATCTTATTTTGATGAAGAAAATCTTCCCAAAGAATTAGGAGGAAAAAGCATATTGACCTATAACCATGAGGATTTCTCAAGATTAATGGCTCAAGATGATTTGAAATGTGCAGCCTTTTGGGAATCTGATAACAATGTTTCAAACCACATTATATAG 828 0.3829 MFHLWTNSQQDQESKELYAESKIKELKGAIGPLSGHSLKYCTDDCLRRYLEARNWNVDKSKKMLEDTLKWRSNYKPEQIRWDEVAMEGETGKLYRANFHDRQGRTVLILRPGMQNTSSMENQMRHLVYLLENAMLNLSQGQEQMAWLIDFTGWSITNTPIKSARETINILQNHYPERLGIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSILTYNHEDFSRLMAQDDLKCAAFWESDNNVSNHII* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0577 275 Gene3D - 3 270 IPR036865 -
Lan10g0577 275 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Lan10g0577 275 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 244 IPR001251 -
Lan10g0577 275 SMART sec14_4 87 241 IPR001251 -
Lan10g0577 275 CDD SEC14 99 239 IPR001251 -
Lan10g0577 275 PANTHER RANDOM SLUG PROTEIN 5-LIKE 7 270 - -
Lan10g0577 275 SUPERFAMILY CRAL/TRIO N-terminal domain 20 83 IPR036273 -
Lan10g0577 275 Pfam CRAL/TRIO, N-terminal domain 39 66 IPR011074 -
Lan10g0577 275 SUPERFAMILY CRAL/TRIO domain 81 250 IPR036865 -
Lan10g0577 275 Pfam CRAL/TRIO domain 90 238 IPR001251 -
Lan10g0577 275 PANTHER GH16843P 7 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0577 Lan-Chr10 4866681 4869797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0577 46 233 Acyl Lipid Metabolism Gene Families AT1G55840 26.794 4.30e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0577 - - lang:109347670 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0577 10 4866681 4869797 Lan5g0429 5 9286760 9291556 LSH