Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0569 ATGTTTTACAGAACTTTACTTTCAAGGCAAAAACTCAACAAACTCAATGCGTTCCTACATTCCCATTTCCCCAAATCTCTTTCCACTCTTCCCACTTTTCTTCACACCACTCATCACTCTCCTTCTTCTTCTTCAACCTTTCAATCATTCCCTAAGTACTTTCACTCCACCCGAGTCACTCAACTCAGTACCAACTCACTCGTCCCAGTTCTCAATTCCGACGACCTAGGCAACGATGATTTTGATAATAGCCATGATGCCACCATGAACGAGTTCTTATCTCGATTTGTGTGGATAATGCGGAAGCGTGTTACTGAATCGTACCCTGATTCGGATAAACAAACGATCGATGGCATGCTTCTTGTTATAATCGAAAAAGTGGTTTCGGAATTGGAGAAGGGAGGGTTTGAGAATATTCTGGAAGGTTCTTCTGCAACGGCGTCGTCGTTTGAATCGGGTGATTTTTTTAGTGAGGATTTGTGGAGTACGGTGTGGGAGGTGAGTAATAAGGTGTTGGAAGATATGAATAAGGAAAGGAAGAAGGAGAAGATGAAGGGTTTTTTGCAGTGTGAGGAAGTCAAAGAGATGTGTAGGTTCGCTGGCGAGGTTGGGATTCGTGGCGATTTGTTGCGAGAGATGAGGTTTAAGTGGGCAAGGGAAAAGATGGAGGAGCATGATTTCTATGAGGGGTTAGAAAGAATAAAAAAAGAAGCTGATGCAGCGCAGGCCGAAGAAGAAAACCAAGAGGGGATTGGGGAATTCGATGTTGTTGGTGAGGAGAAGGTGAATGATAAGGTTGTTACCCTTCCTAAGAGGAAGGGGAAGATTAAGTACAAGATTTACGGGCTTGATTTATCCGATCCTAAGTGGGAAGAAGTGGCTGATAAGATCCATGAGGCAGGGCAGGTTATGTGGCCGGAGGAGCCTAAGCCGATTAGTGGGAAATGCAAGCTTGTTACTGAGAAAATTGTGTCTTTAAATGCTGACGATGATAGCTTATTGACACTGTTGGCTGAATGGAAGGAGCTTTTACAACCAAGCAGAGTAGATTGGATTAGTTTGCTTGACAGGTTGAAACAGAAGAATCCTCCTTTGTACTTCAAGGTGGCAGAAATATTATTGACAGAAGATTCTTTCCAAGCAAATATATCAGACTACTCTAAGCTTATTGATATATATGCTAAAGAGAGCCGGTTTGATGATGCTGAGAGTCTCCTTAAGAAGATGAAAGAAAAAGGTATACTACCAGATGCTCCAACAGCCAGTGTGTTGGTCCACATGTACAGCAAGGTAGGCAATGTTCAACGTGCAAAAGAATCATTTGAAACCTTGAGGAGCTATGGCTTCCAACCAGATGTAAAAGTTTACACCTCAATGATCATGGCCCATGTAACTGCTGGCAATCCTAAGGACGGTGAGGTATTGATGAGGGATATGGAGACAAGAGATATTAAACCCACAAAGGAAATATACATGGCATTGCTCCGATCTTATTCTCAGCATGGTGATGTTCTTGGAGTCAAGCGAATTTTCACAACTATGGAGTTTGCAGGATTCAAGCATACTCTGGAGACGTCCACATTGCTGATTGAGGCAAATGCACATGCAGGTGACCCTGATCAGGCAAGAAGTGACTTTGACCTCATGATGAAACTTGGGCATAAGCCGGATGATAGGTGCACTGCTGGCATGATTGCAGCTTATCAGAAGAAAAACTTATTGGACAAGGCATTAAATCTTCTTTTGGAGCTAGAGAATAATGGATTTGAGCCAGGGGTTGCCACCTATTCTGTTCTTGTGGACTGGTTGGGTGAGTTGCGGCTTGTTGAGGAGGCTGAACATCTTTTATGTAAAATTGCTCTGCTGGGCGAAGCTCCTCCTTTAAAGGTTCAAGTTAGTCTTTGTGCTATGTATGCAAGAGCTGGTAATGAGAAAAAGGTCCTTCAAACTCTGGGCTTTCTGGAATCTAGGAAGGATGAGTTAGGACTAGCTGAGTTTGAGAAGATTATTCGCAGTCTGGTCGCTGGTGGGTTTGAGCAGGATGCACGAAGAATACGCAGTATCATGGAGGCACGAGGTTTCACTATATCAAATCAGAATTCCAATTCATCAAAACAGTTAAAGATGGACCTTGCGAAACTTAGCCTTAGATCACCAAGTCTGAGATAG 2169 0.4315 MFYRTLLSRQKLNKLNAFLHSHFPKSLSTLPTFLHTTHHSPSSSSTFQSFPKYFHSTRVTQLSTNSLVPVLNSDDLGNDDFDNSHDATMNEFLSRFVWIMRKRVTESYPDSDKQTIDGMLLVIIEKVVSELEKGGFENILEGSSATASSFESGDFFSEDLWSTVWEVSNKVLEDMNKERKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLREMRFKWAREKMEEHDFYEGLERIKKEADAAQAEEENQEGIGEFDVVGEEKVNDKVVTLPKRKGKIKYKIYGLDLSDPKWEEVADKIHEAGQVMWPEEPKPISGKCKLVTEKIVSLNADDDSLLTLLAEWKELLQPSRVDWISLLDRLKQKNPPLYFKVAEILLTEDSFQANISDYSKLIDIYAKESRFDDAESLLKKMKEKGILPDAPTASVLVHMYSKVGNVQRAKESFETLRSYGFQPDVKVYTSMIMAHVTAGNPKDGEVLMRDMETRDIKPTKEIYMALLRSYSQHGDVLGVKRIFTTMEFAGFKHTLETSTLLIEANAHAGDPDQARSDFDLMMKLGHKPDDRCTAGMIAAYQKKNLLDKALNLLLELENNGFEPGVATYSVLVDWLGELRLVEEAEHLLCKIALLGEAPPLKVQVSLCAMYARAGNEKKVLQTLGFLESRKDELGLAEFEKIIRSLVAGGFEQDARRIRSIMEARGFTISNQNSNSSKQLKMDLAKLSLRSPSLR* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0569 722 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 417 451 IPR002885 -
Lan10g0569 722 Coils Coil 228 251 - -
Lan10g0569 722 PANTHER OS07G0661900 PROTEIN 6 700 IPR044657 -
Lan10g0569 722 Pfam PPR repeat 595 619 IPR002885 -
Lan10g0569 722 Pfam PPR repeat 564 589 IPR002885 -
Lan10g0569 722 Gene3D Tetratricopeptide repeat domain 538 718 IPR011990 GO:0005515
Lan10g0569 722 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIAL 6 700 - -
Lan10g0569 722 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 557 591 IPR002885 -
Lan10g0569 722 Pfam PPR repeat family 386 429 IPR002885 -
Lan10g0569 722 Gene3D Tetratricopeptide repeat domain 358 517 IPR011990 GO:0005515
Lan10g0569 722 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 522 556 IPR002885 -
Lan10g0569 722 TIGRFAM PPR: pentatricopeptide repeat domain 455 487 IPR002885 -
Lan10g0569 722 TIGRFAM PPR: pentatricopeptide repeat domain 386 418 IPR002885 -
Lan10g0569 722 Pfam Pentatricopeptide repeat domain 445 498 IPR002885 -
Lan10g0569 722 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 382 416 IPR002885 -
Lan10g0569 722 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 452 486 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0569 349 703 Glycosyltransferase AT1G05670 22.817 1.14e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0569 - - lang:109358423 1332.78