Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0533 ATGGCAACCAGATGCAGCACAATCCGCCACATTGTCCAGATCCGTCAGATGCTACGCCGGTGGCGAAACAAGGCACGCATGTCATCGGTCAATCGTGCACCGTCCGATGTGCCATCAGGACACGTGGCAATCTGTGTTGGTAGCAGCTACACCAGATTCGTTGTGCCCACCACGTACCTGAACCACCCCGTATTCAAGAAGCTTCTATTGCAAGCGGAGGAAGAGTACGGTTTCTCCAACCATGGACCGTTGGCTATTCCCTGCGACGAAGAAGTGTTCGAAGAGATTATCCGGTTCATTTCCCGGTCCGAACCGGGAAAGAATTCGAACCGGTTTTTTAATGTTGAGATTGAGGATTTTCAGAGGTATTGCCACTTGGGTGTAAGGAGAAACCTTGATTTCTGGCCCGAAACTCGACCGCTGCTCCCCGGTTTAACTGACAAAACTATTTGGTAG 456 0.5088 MATRCSTIRHIVQIRQMLRRWRNKARMSSVNRAPSDVPSGHVAICVGSSYTRFVVPTTYLNHPVFKKLLLQAEEEYGFSNHGPLAIPCDEEVFEEIIRFISRSEPGKNSNRFFNVEIEDFQRYCHLGVRRNLDFWPETRPLLPGLTDKTIW* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0533 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 144 IPR003676 GO:0009733
Lan10g0533 151 Pfam Auxin responsive protein 14 99 IPR003676 GO:0009733
Lan10g0533 151 PANTHER SMALL AUXIN-UP RNA-RELATED 5 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0533 Lan-Chr10 4321137 4322014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0533 6 150 Calmodulin-binding Proteins AT4G34750 48.649 3.07e-46 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0533 K14488 - gmx:100782525 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0533 10 4321137 4322014 Lan3g0450 3 4030977 4032203 LSH