Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0531 ATGGCCTTAGGAAAATCAAGTAAGCTTCCGCAAAAAGCACTTCTTAAGCAAATTCTGAAGAGATGCTCAAGTCTAGGGAAGAAACAAGGCTATGATCATGATCAAGGGATCCGGTTGGACGTTCCAAAAGGTCACTTTGTTGTGTATGTTGGAGAAAACAGAAGCAGATACATTATTCCAATCTCTATTCTAAGTAGACCAGAGTTTCAAACCTTGCTCCATCAAGCTGAAGAAGAGTTTGGCTTTGATCATGAAAATGGTCTCACAATTCCTTGTGAGGAAGATGTTTTCGAGTCTCTTACATCCATGCTAAGATGA 318 0.3994 MALGKSSKLPQKALLKQILKRCSSLGKKQGYDHDQGIRLDVPKGHFVVYVGENRSRYIIPISILSRPEFQTLLHQAEEEFGFDHENGLTIPCEEDVFESLTSMLR* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0531 105 Pfam Auxin responsive protein 29 104 IPR003676 GO:0009733
Lan10g0531 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 105 IPR003676 GO:0009733
Lan10g0531 105 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0531 Lan-Chr10 4264060 4264917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0531 3 104 Calmodulin-binding Proteins AT4G34750 37.255 3.95e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0531 K14488 - gmx:100778552 177.178