Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0515 ATGGACCACATAACACTATTATTTCCATTCTTATTAACACTTCATCTATCAATATCAGGGGTAATTTCTACAACATTCACTATGGTTAACAAATGCGAATATACAGTGTGGCCAGGAATTCTTTCAAACGCAGGAATCCCACCTCTTTCAACAACTGGCTTCGTTCTTCAAACCGGTGAATCAACTACCATAACCGCTCCAACCTCTTGGGGAGGCCGTTTCTGGGGCCGAACCCATTGCTCCCAAGACTCCACCACCGGAATATTCTCCTGCGTCACAGGCGATTGCGGCTCCGGAGAAATCCAATGTTCTGGTAACGGAGCCACGCCGCCGGCAACCTTGGCCGAGTTCACGTTAGACGGTGCCGGTGGACTTGATTTTTTTGACGTTAGTTTGGTCGACGGTTACAACGTTGCTATGTTGGTGGTCCCAAATGGTGGTTCTTCTGCTGGTAAATGTAGTAGTACTGGTTGTATTGAGGATTTGAACGGCGCGTGTCCTTCAGAGCTGAAGGTTATGAGCGTGGATGGGAATGAGGGTGTTGTCGCGTGTAAGAGCGCGTGTGAGGCGTTTGGGTCGCCGCAGTATTGTTGTAGTGGCGCGTATTCTACGCCGGATACTTGCAAGCCTTCTTCTTACTCGCAGGTGTTCAAGACTGCTTGCCCACGCGCGTATAGCTACGCGTATGATGATAAGACGAGTACGTTTACGTGTCAAAATGCAGATTATACTATTACCTTTTGCCCTGTCCCTAGCACCAGTCAGAAAGCGTCACAGGGGCAAAACACAAACCAAGATAGTTCTTCTCCATCAACCCTACTTAACAACGGCACAATGGTATATGAAGGTGCTGCAGATCAAAGTGAAATATCATGGGCAACATGTACCCACGTGTTCCAATCTCATGCCATTGCCGGCATTATGAGTATCACTATGGTTATTTGGCACTTGTGCCACTTCTTTTAA 966 0.4752 MDHITLLFPFLLTLHLSISGVISTTFTMVNKCEYTVWPGILSNAGIPPLSTTGFVLQTGESTTITAPTSWGGRFWGRTHCSQDSTTGIFSCVTGDCGSGEIQCSGNGATPPATLAEFTLDGAGGLDFFDVSLVDGYNVAMLVVPNGGSSAGKCSSTGCIEDLNGACPSELKVMSVDGNEGVVACKSACEAFGSPQYCCSGAYSTPDTCKPSSYSQVFKTACPRAYSYAYDDKTSTFTCQNADYTITFCPVPSTSQKASQGQNTNQDSSSPSTLLNNGTMVYEGAADQSEISWATCTHVFQSHAIAGIMSITMVIWHLCHFF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0515 321 Gene3D Thaumatin 24 249 IPR037176 -
Lan10g0515 321 CDD TLP-PA 25 248 - -
Lan10g0515 321 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Lan10g0515 321 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Lan10g0515 321 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Lan10g0515 321 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Lan10g0515 321 PANTHER OS03G0233200 PROTEIN 5 275 IPR001938 -
Lan10g0515 321 SUPERFAMILY Osmotin, thaumatin-like protein 24 249 IPR037176 -
Lan10g0515 321 PANTHER BNAA02G17480D PROTEIN 5 275 - -
Lan10g0515 321 Pfam Thaumatin family 30 249 IPR001938 -
Lan10g0515 321 PIRSF PR5 2 288 IPR001938 -
Lan10g0515 321 ProSiteProfiles Thaumatin family profile. 23 249 IPR001938 -
Lan10g0515 321 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Lan10g0515 321 SMART tha2 26 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0515 Lan-Chr10 4113464 4116484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0515 1 269 Receptor kinase-like Gene Family AT5G38280 50.735 5.94e-91 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0515 - - gmx:100785732 536.184