Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan10g0509 | ATGATATTGATGGACTCCAAGGGAGACAAGATTCAAGTCTCTGTCAAAAAGGATGAGTTCAATCAATGGAGAGAATATTTGGTTGAAAATAACACCTATGTCATGTATAATTTCAATGTGTTCCACAATGATCTTCAATTTAAGGCTTGCAATCATGCCTATAGAATGCAATTTACTGTCGATACAACTCTAAGAGATAAAGAGTTTCCCGAAATTCCACAATTTGAATTTGTTTTTAAAAAGTTTGCTGACATACTTGCTGGCAACTTTGAAAGTGATTTGTTAGTAGACATTATTGGCGCTATTGATAAGATGGTTTTCTCTCAGACACAAGCTTCTTTAAAGAAAGTTATTTTCAATCTCAAAGATTCAAGGTAA | 378 | 0.3307 | MILMDSKGDKIQVSVKKDEFNQWREYLVENNTYVMYNFNVFHNDLQFKACNHAYRMQFTVDTTLRDKEFPEIPQFEFVFKKFADILAGNFESDLLVDIIGAIDKMVFSQTQASLKKVIFNLKDSR* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan10g0509 | 125 | SUPERFAMILY | Nucleic acid-binding proteins | 1 | 64 | IPR012340 | - | |
| Lan10g0509 | 125 | CDD | RPA1_DBD_A_like | 1 | 63 | - | - | |
| Lan10g0509 | 125 | Gene3D | - | 1 | 66 | IPR012340 | - | |
| Lan10g0509 | 125 | Pfam | Domain of unknown function DUF223 | 1 | 92 | IPR003871 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan10g0509 | Lan-Chr10 | 3993414 | 3994194 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan10g0509 | 3 | 116 | Core DNA Replication Machinery Family | AT5G45400 | 26.087 | 7.31e-06 | 42.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan10g0509 | - | - | lang:109357934 | 254.988 |