Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0503 ATGGCAACTCGTAGATATGGTTTTGGAAGGGTGGATGAAGCTACTCATCCAGATTCTATGAGAGCAACCTTAGCTGAATTTGTTTCCACTTTCATCTTTGTCTTTGCTGGAGAAGGCTCTGGCCTAGCTCTTGATAAGATTTACTTGGATTCAGCTTTGTCAGCTGGTAAATTATTGGCAATTGCACTTGCACATGCCTTTGCTCTATTTGCTGCTGTATCTGCTAGCATGCATGTATCTGGTGGCCATGTCAACCCTGCCGTGACTTTTGGTGCTCTCATTGGTGGCAGAATCTCCGTTCTCCGTGCCATCTACTACTGGATTGCTCAACTTTTGGGTGCTATTGTAGCTGCCCTTGTTCTTAGGCTTGTCACTAATAACATGAGACCAAATTCCTTCCATGTATCACCTGGTGTTGGTGCAGGGCATGGGCTATTATTAGAGATCATCATGACATTTGGGTTGATGTACACAGTATATGCTACTGCCATTGATCCAAAAAGGGGTACTAGTGGTGCACTTGCACCCTTAGCAATAGGACTCATTGTAGGGGCAAACATCCTTGTTGGAGGGCCATTTGATGGAGCATGCATGAACCCTGCACTTGCTTTTGGGCCTTCATTAGTTGGCTGGAGATGGCACTACCACTGGATCTATTGGGTTGGGCCATTCATTGGTGCTGCCTTGGCTGCAATCATATATGAGTATGGTGTTATCCCAACAGAACCCCCTCACACTCATCAACCTTTGGCTCCAGATGATTACTAG 768 0.4583 MATRRYGFGRVDEATHPDSMRATLAEFVSTFIFVFAGEGSGLALDKIYLDSALSAGKLLAIALAHAFALFAAVSASMHVSGGHVNPAVTFGALIGGRISVLRAIYYWIAQLLGAIVAALVLRLVTNNMRPNSFHVSPGVGAGHGLLLEIIMTFGLMYTVYATAIDPKRGTSGALAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWRWHYHWIYWVGPFIGAALAAIIYEYGVIPTEPPHTHQPLAPDDY* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0503 255 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 255 - -
Lan10g0503 255 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0503 255 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0503 255 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0503 255 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0503 255 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0503 255 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0503 255 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0503 255 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Lan10g0503 255 TIGRFAM MIP: MIP family channel proteins 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0503 255 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan10g0503 255 Gene3D Glycerol uptake facilitator protein. 5 243 IPR023271 -
Lan10g0503 255 PANTHER AQUAPORIN-8 1 255 IPR034294 -
Lan10g0503 255 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0503 Lan-Chr10 3927458 3937726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0503 2 255 Major Intrinsic Protein MIP AT1G73190 73.106 2.39e-126 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0503 K09873 - gmx:100817450 444.506